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Protein Overview: CE10194

General Information:
Name(s) found: CE10194 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00009605 status:Partially_confirmed UniProt:Q20252 protein_id:CAB01189.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 438 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    protein amino acid dephosphorylation [IEALink to PubMed article]
    dephosphorylation [IEALink to PubMed article]
    Molecular Function: protein tyrosine phosphatase activity [IEALink to PubMed article]
    phosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKKSKTKL LQKFADKFKK KKRSKSISMS KERGSELSRR PQKSRSNSKQ KATGPTSALP  60
   61 TDPKSKIDTT FMEITAKGFK SKKGKKLKKK KEETSASKSP STLTLGKAES HMDFSGNVKN 120
  121 VEKGVKVWIE LLEKMDFRKT MEPEFKPIDT MKADLEKCQA FKKNIDFSQS ENVELYDTNR 180
  181 VKGGGEADFF YHGSTLTIPS VTTKSTILAQ LAIVDSPQSL ESFWIMVASQ KIQRLFILLG 240
  241 EEELDKPTLS EYFPEDFKEF KTIRVNNRKT VPKTEEQANT QLYYEVVPKD CAEAPFAMIE 300
  301 ICDFWPDAKI PTMGYNRIAA TAASVFESDI DCDASCAIVS NYGAGRAGSF FVAVLAIEKL 360
  361 QAGEAPNIKE IALSVRSQRP AAIETLSQYM FTYVIALTYG LKHVKDPALK IKTEKVISQL 420
  421 EQFACEKMTE EDKDDTCE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] PSI-BLAST 4.0 Solution structure of PDZ domain of Protein tyrosine phosphatase, non-receptor type 4
    2 View Details [107..438] PSI-BLAST 96.522879 Crystal structure of the phosphatase domains of human PTP SIGMA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  1.66320966436771 bayes_pls_golite062009
  • binding
    		•  1.48311858793555 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle