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Protein Overview: rps-15

General Information:
Name(s) found: rps-15 / CE09945 [WormBase]
Description(s) found:
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  • WBGene00004484 locus:rps-15 40S ribosomal protein S15 status:Confirmed UniProt:Q9XVP0 protein_id:CAB03065.1 [WormBase]
  • gi|75028740|sp|Q9XVP0.3|RS15_CAEEL RecName: Full=40S ribosomal protein S15 [NCBI NR]
  • pir||T21828 hypothetical protein F36A2.6 - Caenorhabditis elegans [NCBI NR]
  • gi|3876773|emb|CAB03065.1| C. elegans protein F36A2.6, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17508693|ref|NP_492384.1| Ribosomal Protein, Small subunit family member (rps-15) [Caenorhabditis elegans] [NCBI NR]
  • 40S ribosomal protein S15 OS=Caenorhabditis elegans GN=rps-15 PE=1 SV=3 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE09945 WBGene00004484 locus:rps-15 40S ribosomal protein S15 status:Confirmed TR:Q9XVP0 protein_id:CAB03065.1 [wormpep150.fasta]
  • 09945 WBGene00004484 locus:rps-15 40S ribosomal protein S15 status:Confirmed TR:Q9XVP0 protein_id:CAB03065.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • ribosomal Protein, Small subunit (17.2 kD) (rps-15) [Caenorhabditis elegans]gi|3876773|emb|CAB03065.1| Hypothetical protein F36A2.6 [Caenorhabditis elegans]gi|7500585|pir||T21828 hypothetical protein F36A2.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • locus:rps-15 40S ribosomal protein S15 status:Confirmed TR:Q9XVP0 protein_id:CAB03065.1 [wormpep115.fasta.reversed]
  • CE09945 locus:rps-15 40S ribosomal protein S15 status:Confirmed TR:Q9XVP0 protein_id:CAB03065.1 [wormpep80.hongbin]
  • CE09945 WBGene00004484 locus:rps-15 40S ribosomal protein S15 status:Confirmed UniProt:RS15_CAEEL protein_id:CAB03065.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE09945 WBGene00004484 locus:rps-15 40S ribosomal protein S15 status:Confirmed UniProt:RS15_CAEEL protein_id:CAB03065.1| [wormORF-contam.fasta]
  • CE09945 WBGene00004484 locus:rps-15 40S ribosomal protein S15 status:Confirmed SW:Q9XVP0 protein_id:CAB03065.1 [wormpep160-contam.fasta]
  • 40S ribosomal protein S15 [nr-271106-contam.fasta]
  • Hypothetical protein F36A2.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Ribosomal Protein, Small subunit family member (rps-15) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE09945 WBGene00004484 locus:rps-15 40S ribosomal protein S15 status:Confirmed UniProt:Q9XVP0 protein_id:CAB03065.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE09945 WBGene00004484 locus:rps-15 status:Confirmed UniProt:Q9XVP0 protein_id:CAB03065.1 40S ribosomal protein S15 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 151 amino acids

    Gene Ontology:
    Cellular Component: small ribosomal subunit [IEALink to PubMed article]
    ribosome [IEALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    translation [IEALink to PubMed article]
    Molecular Function: structural constituent of ribosome [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATQDDAHLA ELKKKRTFRK FMYRGVDLDQ LLDMSREQFT KLLPCRMRRR LDRGLKRKHL  60
   61 ALIAKVQKAK KAAGVLEKPA TVKTHLRDMI ILPELVGGVI GIYNGKVFNQ TEIKPEMIGF 120
  121 YLGEFAISYK PVKHGRPGIG ATHSSRFIPL K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] PSI-BLAST 24.69897 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle