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Protein Overview: CE09735

General Information:
Name(s) found: CE09735 [WormBase]
Description(s) found:
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  • WBGene00017879 locus:acd-4 status:Partially_confirmed UniProt:Q22970 protein_id:CCD70112.1 [WormBase]
  • pir||T28952 hypothetical protein F28A12.1 - Caenorhabditis elegans [NCBI NR]
  • gi|17560284|ref|NP_505230.1| hypothetical protein F28A12.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|1465797|gb|AAC47987.1| Hypothetical protein F28A12.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE09735 WBGene00017879 status:Partially_confirmed TR:Q22970 protein_id:AAC47987.1 [wormpep150.fasta]
  • 09735 WBGene00017879 status:Partially_confirmed TR:Q22970 protein_id:AAC47987.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • amiloride-sensitive channel family member (5J117) [Caenorhabditis elegans]gi|1465797|gb|AAC47987.1| Hypothetical protein F28A12.1 [Caenorhabditis elegans]gi|7500019|pir||T28952 hypothetical protein F28A12.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q22970 protein_id:AAC47987.1 [wormpep115.fasta.reversed]
  • CE09735 status:Predicted TR:Q22970 protein_id:AAC47987.1 [wormpep80.hongbin]
  • CE09735 WBGene00017879 status:Partially_confirmed UniProt:Q22970_CAEEL protein_id:AAC47987.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE09735 WBGene00017879 status:Partially_confirmed UniProt:Q22970_CAEEL protein_id:AAC47987.1| [wormORF-contam.fasta]
  • Hypothetical protein F28A12.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F28A12.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE09735 WBGene00017879 status:Partially_confirmed UniProt:Q22970 protein_id:AAC47987.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE09735 WBGene00017879 locus:acd-4 status:Partially_confirmed UniProt:Q22970 protein_id:CCD70112.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=acd-4 PE=3 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 613 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: sodium ion transport [IEALink to PubMed article]
    ion transport [IEALink to PubMed article]
    Molecular Function: ion channel activity [IEALink to PubMed article]
    sodium channel activity [IEALink to PubMed article]
    amiloride-sensitive sodium channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRKRKLSCF VSVKFPVDSV KKLRKTEGVG SVYQETQHFS TITTVNGPRR IFYGKRSAQI  60
   61 FWILVVISIL AFLVYQIVIL IQYFYSKPTL SQINFITNEG AVYFPSVTVC NLNPVKTSFI 120
  121 KKLNSSGDLS EELLNYLLAT KTNSMYMFNN ANIFELKRAH LNALVYLANH PDFEIVNFLN 180
  181 SAQFDCDELF ETCFYGGKQF NCCKYMTQSI TSLGRCWELN LRNETDAWLT KKGRSGTSPK 240
  241 TGLQIIANAR QSEQFINFHY SSFQENGFRY FIHPPHVSPD LAAEGITVSP SRVVNSAIKT 300
  301 VLHDLLNHEN WGNCTSSWPE HYNTNLPYSS SACQALCVSN YFKKLCGCSP YSYNIDNNTQ 360
  361 VCLPYEEVIC MMEKMTKSDS NGTVSLDFPF CAECHLACQK TSYSSYTSYG DGFNYNSMKW 420
  421 LTRETNRSAS YIRQNIAIIN IHFMELFYTS YSQVKATTIL NTFNKIFGLN GLWFGMSVVS 480
  481 LTELILYFTK ISWIAVSSKR RQYLFEKKMS EKRKERNIEE AVQEAEISRS RRSSAANLKF 540
  541 LDIESLDDED YWYRSSSQLS DSHLDNVIQL AIDFEKPLQR PSAISLPRIS ECCEDFEEED 600
  601 EDENNDLGII IKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..511] PSI-BLAST 105.0 No description for 2qtsA was found.
    2 View Details [512..613] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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