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View Structure Prediction Details

Protein: CE09735
Organism: Caenorhabditis elegans
Length: 613 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09735.

Description E-value Query
Range
Subject
Range
gi|187038209, gi... - gi|39581559|emb|CAE58344.1| Hypothetical protein CBG01465 [Caenorhabditis briggsae], gi|187038209|em...
gi|157760199 - gi|157760199|ref|XP_001672442.1| Hypothetical protein CBG01465 [Caenorhabditis briggsae AF16]
471.0 [0..4] [595..1]

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Predicted Domain #1
Region A:
Residues: [1-511]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRKRKLSCF VSVKFPVDSV KKLRKTEGVG SVYQETQHFS TITTVNGPRR IFYGKRSAQI  60
   61 FWILVVISIL AFLVYQIVIL IQYFYSKPTL SQINFITNEG AVYFPSVTVC NLNPVKTSFI 120
  121 KKLNSSGDLS EELLNYLLAT KTNSMYMFNN ANIFELKRAH LNALVYLANH PDFEIVNFLN 180
  181 SAQFDCDELF ETCFYGGKQF NCCKYMTQSI TSLGRCWELN LRNETDAWLT KKGRSGTSPK 240
  241 TGLQIIANAR QSEQFINFHY SSFQENGFRY FIHPPHVSPD LAAEGITVSP SRVVNSAIKT 300
  301 VLHDLLNHEN WGNCTSSWPE HYNTNLPYSS SACQALCVSN YFKKLCGCSP YSYNIDNNTQ 360
  361 VCLPYEEVIC MMEKMTKSDS NGTVSLDFPF CAECHLACQK TSYSSYTSYG DGFNYNSMKW 420
  421 LTRETNRSAS YIRQNIAIIN IHFMELFYTS YSQVKATTIL NTFNKIFGLN GLWFGMSVVS 480
  481 LTELILYFTK ISWIAVSSKR RQYLFEKKMS E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 105.0
Match: 2qtsA
Description: No description for 2qtsA was found.

Predicted Domain #2
Region A:
Residues: [512-613]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRKERNIEEA VQEAEISRSR RSSAANLKFL DIESLDDEDY WYRSSSQLSD SHLDNVIQLA  60
   61 IDFEKPLQRP SAISLPRISE CCEDFEEEDE DENNDLGIII KL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle