YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: sur-6

General Information:
Name(s) found: sur-6 / CE09685 [WormBase]
Description(s) found:
Found 23 descriptions.
SHOW ALL
  • WBGene00006352 locus:sur-6 status:Confirmed UniProt:G5EDR3 protein_id:CAB03008.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 495 amino acids

    Gene Ontology:
    Cellular Component: protein phosphatase type 2A complex [IEALink to PubMed article]
    Biological Process: embryonic cleavage [IMPLink to PubMed articleLink to PubMed article]
    spindle organization [IMPLink to PubMed article]
    positive regulation of vulval development [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    oviposition [IMPLink to PubMed article]
    Molecular Function: protein phosphatase type 2A regulator activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMEVDEPAV AATTSQNQPQ EHANDFDMDT SEGPIENDET FEPVDQINWK FNQVKGNIDA  60
   61 DVHTEADVIS CVEFSHDGEY LATGDKGGRV VIFQRDQSGK YVKGVRSREY NVYSTFQSHE 120
  121 PEFDYLKSLE IDEKINQIRW LKKKNAANFI LSTNDKTIKL WKISERERKI GDDAWNLPRT 180
  181 NRINTSSFRG RLQIPSIVPM ELIVEASPRR VYGNAHTYHV NSISVNSDQE TFLSADDLRV 240
  241 NLWNLEITNE SFNIVDIKPA NMEELTEVIT AAEFHPTQCN WFVYSSSKGS IRLCDMRDRA 300
  301 LCDAYAKIFE EPEDPQSRSF FSEIIASVSD VKFSHNGRYL LTRDYLTVKV WDLNMESQPV 360
  361 ETYPVHNYLR TKLCALYEND SIFDKFECDW SGDDKHILTG SYHNLFRSYA RGNNQDAKTW 420
  421 EARPQEPHSQ LRSRFVVPSA KRKRNNLSSS GETTEEDLSS DQLQFDRKIL HTAWHPKDNI 480
  481 IALAATNNLY IFSDV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..495] PSI-BLAST 43.045757 Actin interacting protein 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytoskeletal protein binding
    		•  3.1056443224755 bayes_pls_golite062009
  • actin binding
    		•  2.82238441497141 bayes_pls_golite062009
  • tubulin binding
    		•  2.76945430061825 bayes_pls_golite062009
  • microtubule binding
    		•  2.72684103222924 bayes_pls_golite062009
  • dynein binding
    		•  2.54821997913979 bayes_pls_golite062009
  • binding
    		•  2.42570478946173 bayes_pls_golite062009
  • hydrolase activity
    		•  1.72636554646684 bayes_pls_golite062009
  • structural molecule activity
    		•  1.47448876401574 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.2886835964948 bayes_pls_golite062009
  • protein binding
    		•  1.21879977456466 bayes_pls_golite062009
  • actin filament binding
    		•  1.10832047454002 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.0160811807475 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.826090766828089 bayes_pls_golite062009
  • DNA binding
    		•  0.561578774129549 bayes_pls_golite062009
    		• 0.53274018413176 bayes_pls_golite062009
  • kinase activity
    		•  0.498626428956965 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.496422970081867 bayes_pls_golite062009
  • snoRNA binding
    		•  0.347797037104681 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.326899344050856 bayes_pls_golite062009
  • transcription corepressor activity
    		•  0.259860754265901 bayes_pls_golite062009
  • protein kinase activity
    		•  0.245792286293244 bayes_pls_golite062009
  • myosin binding
    		•  0.16849147094895 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.118975415284669 bayes_pls_golite062009
  • transcription factor activity
    		•  0.00445255815744083 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle