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Protein Overview: ssp-19

General Information:
Name(s) found: ssp-19 / CE09025 [WormBase]
Description(s) found:
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  • WBGene00006047 locus:ssp-19 Sperm-specific class P protein 19 status:Confirmed UniProt:O01829 protein_id:CCD68120.1 [WormBase]
  • pir||T15224 hypothetical protein C55C2.2 - Caenorhabditis elegans [NCBI NR]
  • gi|74956163|sp|O01829.1|SSP19_CAEEL RecName: Full=Sperm-specific class P protein 19 [NCBI NR]
  • gi|40889684|pdb|1ROW|B Chain B, Structure Of Ssp-19, An Msp-Domain Protein Like Family Member In Caenorhabditis Elegans [NCBI NR]
  • gi|40889683|pdb|1ROW|A Chain A, Structure Of Ssp-19, An Msp-Domain Protein Like Family Member In Caenorhabditis Elegans [NCBI NR]
  • gi|2088756|gb|AAB54194.1| Sperm-specific family, class p protein 19 [Caenorhabditis elegans] [NCBI NR]
  • gi|17508751|ref|NP_491000.1| Sperm-Specific family, class P family member (ssp-19) [Caenorhabditis elegans] [NCBI NR]
  • Sperm-specific class P protein 19 OS=Caenorhabditis elegans GN=ssp-19 PE=1 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE09025 WBGene00006047 locus:ssp-19 status:Confirmed TR:O01829 protein_id:AAB54194.1 [wormpep150.fasta]
  • 09025 WBGene00006047 locus:ssp-19 status:Confirmed TR:O01829 protein_id:AAB54194.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • Sperm-Specific family, class P SSP-19, MSP-domain protein like family member (11.0 kD) (ssp-19) [Caenorhabditis elegans]gi|2088756|gb|AAB54194.1| Sperm-specific family, class p protein 19 [Caenorhabditis elegans]gi|7497991|pir||T15224 hypothetical prote [nrdb_11152004_Chlamydomonas]
  • locus:ssp-19 status:Confirmed TR:O01829 protein_id:AAB54194.1 [wormpep115.fasta.reversed]
  • CE09025 locus:ssp-19 status:Confirmed [wormpep80.hongbin]
  • CE09025 WBGene00006047 locus:ssp-19 status:Confirmed UniProt:SSP19_CAEEL protein_id:AAB54194.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE09025 WBGene00006047 locus:ssp-19 status:Confirmed UniProt:SSP19_CAEEL protein_id:AAB54194.1| [wormORF-contam.fasta]
  • CE09025 WBGene00006047 locus:ssp-19 status:Confirmed SW:O01829 protein_id:AAB54194.1 [wormpep160-contam.fasta]
  • Sperm-Specific family, class P family member (ssp-19) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Sperm-specific family, class p protein 19 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Chain B, Structure Of Ssp-19, An Msp-Domain Protein Like Family Member In Caenorhabditis Elegans [nr-271106-contam.fasta]
  • Sperm-specific class P protein 19 [nr-271106-contam.fasta]
  • Chain A, Structure Of Ssp-19, An Msp-Domain Protein Like Family Member In Caenorhabditis Elegans [nr-271106-contam.fasta]
  • CE09025 WBGene00006047 locus:ssp-19 status:Confirmed UniProt:O01829 protein_id:AAB54194.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE09025 WBGene00006047 locus:ssp-19 status:Confirmed UniProt:O01829 protein_id:CCD68120.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE09025 WBGene00006047 locus:ssp-19 status:Confirmed UniProt:O01829 protein_id:CCD68120.1 Sperm-specific class P protein 19 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 109 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: structural molecule activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTADPPAC TVPAAGVSST HKLVNGGAEK IVFKIKSSNN NEYRIAPVFG FVDPSGSKDV  60
   61 VITRTAGAPK EDKLVVHFAS APADATDAQA AFVAVAPAGT VTIPMSATA

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|219109291, gi... ssp-19

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] PSI-BLAST 33.69897 Structure of SSP-19, an MSP-domain protein like family member in Caenorhabditis elegans

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.653234420802729 bayes_pls_golite062009
  • protein binding
    		•  0.170808849690486 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle