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Protein Overview: acdh-1

General Information:
Name(s) found: acdh-1 / CE09015 [WormBase]
Description(s) found:
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  • WBGene00016943 locus:acdh-1 status:Confirmed UniProt:H2KZG6 protein_id:CCD68091.1 [WormBase]
  • gi|17506239|ref|NP_491871.1| Acyl CoA DeHydrogenase family member (acdh-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|14573994|gb|AAK68275.1|AC006625_7 Acyl coa dehydrogenase protein 1, isoform a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE09015 WBGene00016943 locus:acdh-1 acyl-CoA dehydrogenase status:Confirmed TR:Q966M3 protein_id:AAK68275.1 [wormpep150.fasta]
  • 09015 WBGene00016943 acyl-CoA dehydrogenase status:Confirmed TR:Q966M3 protein_id:AAK68275.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • acyl-Coenzyme A dehydrogenase short branched chain family member (47.1 kD) (1H75) [Caenorhabditis elegans]gi|14573994|gb|AAK68275.1| Hypothetical protein C55B7.4a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • 09015 WBGene00016943 locus:acdh-1 acyl-CoA dehydrogenase status:Confirmed TR:Q966M3 protein_id:AAK68275.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • acyl-CoA dehydrogenase status:Confirmed TR:Q966M3 protein_id:AAK68275.1 [wormpep115.fasta.reversed]
  • CE09015 acyl-CoA dehydrogenase status:Confirmed TR:Q966M3 protein_id:AAK68275.1 [wormpep80.hongbin]
  • CE09015 WBGene00016943 locus:acdh-1 acyl-CoA dehydrogenase status:Confirmed UniProt:Q966M3_CAEEL protein_id:AAK68275.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE09015 WBGene00016943 locus:acdh-1 acyl-CoA dehydrogenase status:Confirmed UniProt:Q966M3_CAEEL protein_id:AAK68275.1| [wormORF-contam.fasta]
  • Acyl coa dehydrogenase protein 1, isoform a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Acyl CoA DeHydrogenase family member (acdh-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE09015 WBGene00016943 locus:acdh-1 acyl-CoA dehydrogenase status:Confirmed UniProt:Q966M3 protein_id:AAK68275.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE09015 WBGene00016943 locus:acdh-1 acyl-CoA dehydrogenase status:Confirmed UniProt:H2KZG6 protein_id:CCD68091.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE09015 WBGene00016943 locus:acdh-1 status:Confirmed UniProt:H2KZG6 protein_id:CCD68091.1 Probable acyl-CoA dehydrogenase [wormpep246-ecoli-contam.fasta]
  • Acyl CoA DeHydrogenase OS=Caenorhabditis elegans GN=acdh-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 427 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: electron transport [IEALink to PubMed article]
    determination of adult lifespan [IMPLink to PubMed article]
    Molecular Function: acyl-CoA dehydrogenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSTTKILK QAMNIISTIR SSYSTATAVS ISRHCEDFTG TPPPVNLLTE NELFFADTVR  60
   61 KFSKDVVKPL VREMDKYSKM SPIVTQGVFE NGLMGVHVPE EYGGSGSSFF NAMIVIEELA 120
  121 KTDPSVSAMV GIHNTLPVSM IIDYGTEEQK LKYLPRLCSD SLASFCISES GAGSDAFALK 180
  181 TIAKRDGDHF LISGTKMWIT NSGEAQVFVV FANADPSQKY KGITCFIVER SADGLTVDKE 240
  241 EDKLGIRASS TCQVHFDNVR VHKSAILGEY GKGYKYAIEC LNAGRIAIGA QMIGLAQGCF 300
  301 DQTIPYLQQR EQFGQRLIDF QGLQHQIAQA RTEIEAARLL VYNAARMKEY GIPYVREAAM 360
  361 AKLFASQVAT STSAQCVKWL GGVGFTKEFP AEKFYRDAMI GEIYEGTSNI QLNTIAKLID 420
  421 NEYKWKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..427] PSI-BLAST 119.0 No description for 2jifA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle