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Protein Overview: CE08806

General Information:
Name(s) found: CE08806 [WormBase]
Description(s) found:
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  • WBGene00016742 status:Partially_confirmed UniProt:O01508 protein_id:CCD67581.1 [WormBase]
  • pir||T28921 hypothetical protein C48B6.4 - Caenorhabditis elegans [NCBI NR]
  • gi|1938567|gb|AAC48164.1| Hypothetical protein C48B6.4 [Caenorhabditis elegans] [NCBI NR]
  • gi|17506105|ref|NP_491968.1| hypothetical protein C48B6.4 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE08806 WBGene00016742 status:Partially_confirmed TR:O01508 protein_id:AAC48164.1 [wormpep150.fasta]
  • 08806 WBGene00016742 status:Partially_confirmed TR:O01508 protein_id:AAC48164.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative N-myristoylated nuclear protein, with a coiled coil-4 domain (1H465) [Caenorhabditis elegans]gi|1938567|gb|AAC48164.1| Hypothetical protein C48B6.4 [Caenorhabditis elegans]gi|7497595|pir||T28921 hypothetical protein C48B6.4 - Caenorhabditis ele [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:O01508 protein_id:AAC48164.1 [wormpep115.fasta.reversed]
  • CE08806 status:Predicted TR:O01508 protein_id:AAC48164.1 [wormpep80.hongbin]
  • CE08806 WBGene00016742 status:Partially_confirmed UniProt:O01508_CAEEL protein_id:AAC48164.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE08806 WBGene00016742 status:Partially_confirmed UniProt:O01508_CAEEL protein_id:AAC48164.1| [wormORF-contam.fasta]
  • Hypothetical protein C48B6.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C48B6.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE08806 WBGene00016742 status:Partially_confirmed UniProt:O01508 protein_id:AAC48164.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE08806 WBGene00016742 status:Partially_confirmed UniProt:O01508 protein_id:CCD67581.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=C48B6.4 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 623 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein amino acid dephosphorylation [IEALink to PubMed article]
    Molecular Function: protein tyrosine phosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAKSSKKAK ISPPADRYYT KVDIESGPAV VAKSQDFILE VPVIPETCEE SIPDSRISRD  60
   61 VSEVSRVSSG SEVDVTGSGV DDEHLDIQSS DDSVESIFDP LLYLANQGID VTHSNIRELV 120
  121 CSENYREFLK QRKTMLTPKE LFELEHGRIP GNYGKSKPKE EILKEIDELE CKADDLLTDL 180
  181 SDDENGWPKY DMNALLEKYE NHKDSEPNLL IPTKEDYERD KKTCCQQVLN SYEFDMVESS 240
  241 INGHGLEFEC LGPDATRTQD FWTQCHKDRI SLITMFGKFL EKRGANCKQY IPDDKQEILK 300
  301 CGQIIVRRLT DPEYPYRHCK IQKFAVRCKL VPENYGWYVV WHCQRDIQEY PSKDYTKEDE 360
  361 EFENLRKDLL NDMPTQHWLF HGPMQFSPLR DRLVERNSYL IEKKGSSVPD FVTQPIQAAN 420
  421 ARKALYEKSC YLGFLTSSSS QISLSGCQSR QIGGADEVEN LVKLETEEFD LQKSLGSYPI 480
  481 QSQNRLNNVI QIYANSPDPE QTQDFWQMIL HKGIPTIHTI SDLDPEETAN CASYFPYGSE 540
  541 SEKSCGIYTV KRLGIETQLS MNLKKQQLLI FKMGESEYQN VVNVTHFHEI VKNQVTDSKV 600
  601 RNIEIINEHV SRQSNPQLLI HGP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..153] PSI-BLAST 56.39794 Crystal structure of human tyrosine phosphatase SHP-1
    2 View Details [154..623] PSI-BLAST 128.0 Crystal structure of the phosphatase domains of human PTP SIGMA


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle