YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE08788

General Information:
Name(s) found: CE08788 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00016730 status:Partially_confirmed UniProt:Q9GYJ7 protein_id:CCD66221.1 [WormBase]
  • gi|9802875|gb|AAF99885.1| Hypothetical protein C46H11.6 [Caenorhabditis elegans] [NCBI NR]
  • pir||T25637 hypothetical protein C46H11.6 - Caenorhabditis elegans [NCBI NR]
  • gi|17506055|ref|NP_491502.1| hypothetical protein C46H11.6 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE08788 WBGene00016730 status:Partially_confirmed TR:Q9GYJ7 protein_id:AAF99885.1 [wormpep150.fasta]
  • 08788 WBGene00016730 status:Partially_confirmed TR:Q9GYJ7 protein_id:AAF99885.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • PDZ/DHR/GLGF domain containing protein (1F591) [Caenorhabditis elegans]gi|9802875|gb|AAF99885.1| Hypothetical protein C46H11.6 [Caenorhabditis elegans]gi|7497523|pir||T25637 hypothetical protein C46H11.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q9GYJ7 protein_id:AAF99885.1 [wormpep115.fasta.reversed]
  • CE08788 status:Predicted TR:Q9GYJ7 protein_id:AAF99885.1 [wormpep80.hongbin]
  • CE08788 WBGene00016730 status:Partially_confirmed UniProt:Q9GYJ7_CAEEL protein_id:AAF99885.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE08788 WBGene00016730 status:Partially_confirmed UniProt:Q9GYJ7_CAEEL protein_id:AAF99885.1| [wormORF-contam.fasta]
  • Hypothetical protein C46H11.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C46H11.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE08788 WBGene00016730 status:Partially_confirmed UniProt:Q9GYJ7 protein_id:AAF99885.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE08788 WBGene00016730 status:Partially_confirmed UniProt:Q9GYJ7 protein_id:CCD66221.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=C46H11.6 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 342 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKKVQNTN KKMKECWLTP IPQNVETVNM TVSFKIDEKD VGKPANEVIR INENSMVSFL  60
   61 STNSFYNGLI LSDKIVKVNG ASGNISKYQT ELMKGETCSV EVTRRKNIIP ATRERLKKSG 120
  121 CVLRRDNTCF VIEVEKTSAM KSATVGVTVT YIQKRGIVTR IEPSSLASIF FGRGDLIMDI 180
  181 NEESILNAEK NDDFIREKLS GILKGEKVTF LVERPVSVES ANTLRHLIES VAPDPDVKMA 240
  241 NDAICIGRNA SNMHYNVLKK LQPKSILSRD VFKGKNPREK KPGKKLSKEK DNTIKISTAT 300
  301 STANISTDVA EDEIDNLKNV VTKSHAVRSG DEEEERGAFD DE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..232] FFAS03 2.1 Structural Insights into the Inter-domain Chaperoning of Tandem PDZ Domains in Glutamate Receptor Interacting Proteins
    2 View Details [233..342] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  1.4754504373406 bayes_pls_golite062009
  • binding
    		•  1.35789856813389 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle