| Protein: | CE08788 |
| Organism: | Caenorhabditis elegans |
| Length: | 342 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08788.
| Description | E-value | Query Range |
Subject Range |
|
|
486.0 | [0..12] | [342..3] |
|
Region A: Residues: [1-232] |
1 11 21 31 41 51
| | | | | |
1 MSKKKVQNTN KKMKECWLTP IPQNVETVNM TVSFKIDEKD VGKPANEVIR INENSMVSFL 60
61 STNSFYNGLI LSDKIVKVNG ASGNISKYQT ELMKGETCSV EVTRRKNIIP ATRERLKKSG 120
121 CVLRRDNTCF VIEVEKTSAM KSATVGVTVT YIQKRGIVTR IEPSSLASIF FGRGDLIMDI 180
181 NEESILNAEK NDDFIREKLS GILKGEKVTF LVERPVSVES ANTLRHLIES VA
|
| Detection Method: |  |
| Confidence: | 2.1 |
| Match: | 1p1dA |
| Description: | Structural Insights into the Inter-domain Chaperoning of Tandem PDZ Domains in Glutamate Receptor Interacting Proteins |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.4754504373406 | bayes_pls_golite062009 |
| binding | 1.35789856813389 | bayes_pls_golite062009 |
|
Region A: Residues: [233-342] |
1 11 21 31 41 51
| | | | | |
1 PDPDVKMAND AICIGRNASN MHYNVLKKLQ PKSILSRDVF KGKNPREKKP GKKLSKEKDN 60
61 TIKISTATST ANISTDVAED EIDNLKNVVT KSHAVRSGDE EEERGAFDDE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
