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Protein Overview: tyr-4

General Information:
Name(s) found: tyr-4 / CE08574 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00016419 locus:tyr-4 status:Confirmed UniProt:O01497 protein_id:CCD66683.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 751 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEALink to PubMed article]
    Molecular Function: oxidoreductase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLIPIIFT TLPLCLQAQE DPCASAPSEA AKIMCKQIHR WDDGARAASK KKKIALPPGM  60
   61 AKGMAAEFAP IASNIYQCMD LPCLCSYLRG TASGNGCTLP NGRPLQKSVR KEYRTLTDDE 120
  121 RNRLHAAFRA LKNNGEYERI GRIHSQMSAA GGAHSGPAFL PWHREFVKRV EFALRQVDPT 180
  181 VNLPYWDSTL DSRLPRPADT IMFSDYLMGS TGLVNDGPFT NWRTLAGRAQ ILRAVGAQGA 240
  241 PLSQNDIDFV MRQTQIDQVL SFTAPQQGCP YRTDFNCLEY THGNVHIFVG GDMFDTATSS 300
  301 NDPSFFLHHA FIDFVWEEWR LARQSRADRE IAFPPDNQLC ASAQHFGASP MQPFSPMRNI 360
  361 DGLSNKYTDN LYSYAPRPTC QAGGDCGSKF LFCDTSTGAA RCVSRIRPGS QCGQFRVNPC 420
  421 FSGICQNGVC VLSSTAPRPT PAPTTPTPQN PVQSQESCFN ENQCCASWAA SGECSRNTAY 480
  481 MNEWCKASCG VCKPKYRLAD DCTDRHTQCS SWSRSGECTK NQLWMTENCR KSCNKCGRSR 540
  541 AQECGGGGTT VTTTTPAPAQ QCDNSDGCFN ENVCCAVWGL MGECRKNTRY MACNCRVSCG 600
  601 HCYPEDYNYG SCVDYHRSCA GWARVGECQK NPWMAENCRS SCNSCYTQSE LRRMCGTTAG 660
  661 SVAPVAQVRQ TNPSRQPPRG GWGRDDFGDN GGWGGNGGGG WGNNDPWGGS RWGGGRGGWG 720
  721 GGGWGGGGWG KRSIRAANAS ISMPSFDPDL L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] deduced N/A No confident structure predictions are available.
    2 View Details [97..326] PSI-BLAST 61.30103 Crystal Structure of the oxy-form of the copper-bound Streptomyces castaneoglobisporus tyrosinase complexed with a caddie protein prepared by the addition of hydrogenperoxide
    3 View Details [327..751] PSI-BLAST 13.522879 Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.286076792172079 bayes_pls_golite062009
  • protein binding
    		•  0.14494900666454 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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