| Protein: | tyr-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 751 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tyr-4.
| Description | E-value | Query Range |
Subject Range |
|
|
352.0 | [0..18] | [751..19] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MRFLIPIIFT TLPLCLQAQE DPCASAPSEA AKIMCKQIHR WDDGARAASK KKKIALPPGM 60
61 AKGMAAEFAP IASNIYQCMD LPCLCSYLRG TASGNG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [97-326] |
1 11 21 31 41 51
| | | | | |
1 CTLPNGRPLQ KSVRKEYRTL TDDERNRLHA AFRALKNNGE YERIGRIHSQ MSAAGGAHSG 60
61 PAFLPWHREF VKRVEFALRQ VDPTVNLPYW DSTLDSRLPR PADTIMFSDY LMGSTGLVND 120
121 GPFTNWRTLA GRAQILRAVG AQGAPLSQND IDFVMRQTQI DQVLSFTAPQ QGCPYRTDFN 180
181 CLEYTHGNVH IFVGGDMFDT ATSSNDPSFF LHHAFIDFVW EEWRLARQSR
|
| Detection Method: | |
| Confidence: | 61.30103 |
| Match: | 1wx2A |
| Description: | Crystal Structure of the oxy-form of the copper-bound Streptomyces castaneoglobisporus tyrosinase complexed with a caddie protein prepared by the addition of hydrogenperoxide |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [327-751] |
1 11 21 31 41 51
| | | | | |
1 ADREIAFPPD NQLCASAQHF GASPMQPFSP MRNIDGLSNK YTDNLYSYAP RPTCQAGGDC 60
61 GSKFLFCDTS TGAARCVSRI RPGSQCGQFR VNPCFSGICQ NGVCVLSSTA PRPTPAPTTP 120
121 TPQNPVQSQE SCFNENQCCA SWAASGECSR NTAYMNEWCK ASCGVCKPKY RLADDCTDRH 180
181 TQCSSWSRSG ECTKNQLWMT ENCRKSCNKC GRSRAQECGG GGTTVTTTTP APAQQCDNSD 240
241 GCFNENVCCA VWGLMGECRK NTRYMACNCR VSCGHCYPED YNYGSCVDYH RSCAGWARVG 300
301 ECQKNPWMAE NCRSSCNSCY TQSELRRMCG TTAGSVAPVA QVRQTNPSRQ PPRGGWGRDD 360
361 FGDNGGWGGN GGGGWGNNDP WGGSRWGGGR GGWGGGGWGG GGWGKRSIRA ANASISMPSF 420
421 DPDLL
|
| Detection Method: | |
| Confidence: | 13.522879 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.286076792172079 | bayes_pls_golite062009 |
| protein binding | 0.14494900666454 | bayes_pls_golite062009 |
