YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE08453

General Information:
Name(s) found: CE08453 [WormBase]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • WBGene00016220 status:Partially_confirmed UniProt:Q9TZB8 protein_id:CCD66065.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 226 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    transcription cofactor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTLISRQLG LLLHAHECVR RDIKIREAAE KNEPAPHAMC KIQDCVIMKE VLKHMTSCKE  60
   61 GPKCNSVHCA SSRTILSHWK KCFNEECPVC KPIIEQRTAP PQDTTPAEPK KPEHDQIWHL 120
  121 EVPKTYRSEL IEKIYKGIMS NVKPGTLSEA QMDTWKEYSR SAELQIFDTA QKLEAYYHMA 180
  181 REKVCRYQEG FPRRQKTEEK DESDGSEKED EADDRLEGTS TDYQGS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] PSI-BLAST 27.154902 CREB-binding transcriptional adaptor protein CBP (p300)
    2 View Details [112..226] PSI-BLAST 34.39794 Solution structure of the KIX domain of CBP bound to the transactivation domain of c-Myb

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.295152393103135 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle