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Protein Overview: set-31

General Information:
Name(s) found: set-31 / CE08182 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00007615 locus:set-31 status:Confirmed UniProt:O17585 protein_id:CAB02737.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 503 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    chromatin [IEALink to PubMed article]
    Biological Process: chromatin assembly or disassembly [IEALink to PubMed article]
    Molecular Function: chromatin binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKDIKKKA KSRKSKNAIK KNASKSRKCD KISTQNTGKV DTEFYEVQDI VRSRIEGREI  60
   61 QYTVKWTNWN GGDTEEAERR LVCTEKLMGY AARTLKSSYV TNLDFFLRNL DTALSDLVFF 120
  121 TNTLIPLSIV AEATVFGSSV KFVTRDNIGA KIMYLKYIKE HNQMHLLHSF LVPQIDRVNS 180
  181 SHIQYDKEMK YQRQIFEDYP FVKIFYPTKK QSVLFPPPPL PNILFEPVTE EMYKNRENFP 240
  241 HFFPRKGIKA GFNNVRPFID RLYFAKDESQ QPKYLKEVDE NKYEGMRRIN KAVNSRFSIP 300
  301 LEMRQEPGSG WYILSAMYSL PNVPLMVMTG VIRPAEVARE SLRTEGKEVA FSSFVEIPGT 360
  361 DLCLDRREFY DFSKFIPHSC NPTCNVRLVE SGNDIPDLVI YSRFPLDEGN GYVITLDYFK 420
  421 AFKKEVEEYF SKVVAPDGKL FHLLEKDIDF VQCKCEHKCR EIVYIDQSAK KKSEKEKLTS 480
  481 TFNGMSLVES PKIWKIKNGN FLE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] PSI-BLAST 9.0 No description for 2dntA was found.
    2 View Details [97..178] PSI-BLAST 4.0 No description for 2fmmA was found.
    3 View Details [179..503] PSI-BLAST 51.30103 No description for 2r3aA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.374364652893655 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle