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View Structure Prediction Details

Protein: set-31
Organism: Caenorhabditis elegans
Length: 503 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for set-31.

Description E-value Query
Range
Subject
Range
gi|91077470 - gi|91077470|ref|XP_975868.1| PREDICTED: similar to heterochromatin protein isoform 2 [Tribolium cast...
295.0 [0..13] [489..116]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKDIKKKA KSRKSKNAIK KNASKSRKCD KISTQNTGKV DTEFYEVQDI VRSRIEGREI  60
   61 QYTVKWTNWN GGDTEEAERR LVCTEKLMGY AARTLK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.0
Match: 2dntA
Description: No description for 2dntA was found.

Predicted functions:

Term Confidence Notes
binding 0.374364652893655 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [97-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSYVTNLDFF LRNLDTALSD LVFFTNTLIP LSIVAEATVF GSSVKFVTRD NIGAKIMYLK  60
   61 YIKEHNQMHL LHSFLVPQID RV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 2fmmA
Description: No description for 2fmmA was found.

Predicted Domain #3
Region A:
Residues: [179-503]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSSHIQYDKE MKYQRQIFED YPFVKIFYPT KKQSVLFPPP PLPNILFEPV TEEMYKNREN  60
   61 FPHFFPRKGI KAGFNNVRPF IDRLYFAKDE SQQPKYLKEV DENKYEGMRR INKAVNSRFS 120
  121 IPLEMRQEPG SGWYILSAMY SLPNVPLMVM TGVIRPAEVA RESLRTEGKE VAFSSFVEIP 180
  181 GTDLCLDRRE FYDFSKFIPH SCNPTCNVRL VESGNDIPDL VIYSRFPLDE GNGYVITLDY 240
  241 FKAFKKEVEE YFSKVVAPDG KLFHLLEKDI DFVQCKCEHK CREIVYIDQS AKKKSEKEKL 300
  301 TSTFNGMSLV ESPKIWKIKN GNFLE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.30103
Match: 2r3aA
Description: No description for 2r3aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle