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Protein Overview: pgl-1

General Information:
Name(s) found: pgl-1 / CE07628 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00003992 locus:pgl-1 status:Partially_confirmed UniProt:Q304E5 protein_id:CCD62011.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 771 amino acids

    Gene Ontology:
    Cellular Component: P granule [IDALink to PubMed article]
    Biological Process: oogenesis [IMPLink to PubMed article]
    germ-line stem cell division [IMPLink to PubMed article]
    P granule organization [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: RNA binding [ISSLink to PubMed article]
    protein self-association [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVSDLRVSK RTTRRERGSC NFDLVPIFFS VFLLFWFHPF HMEANKREIV DFGGLRSYFF  60
   61 PNLAHYITKN DEELFNNTSQ ANKLAAFVLG ASKDAPGDED ILEMILPNDA NAAVIAAGMD 120
  121 VCLLLGDKFR PKFDAAAEKL SGLGHAHDLV SVIDDDKKLG MLARKAKLKK TEDAKILQAL 180
  181 LKVIAIDDAA EKFVELTELV SQLDLDFDVY VLTKILGLIS EETSDEVDII RDNVVNAFDS 240
  241 CKPLLKQLML DGPKSEPADP FISLLMDPLE ESVGKVVNHI AQLFEEASKN EGDESLVLRS 300
  301 QLGYQLFFLI VRSLADGKRE VSKKILSGIP TSVRAEVFPG LQRSVYKSAV FLGNHIIQVL 360
  361 LGSKKSFEDW DVVGVAKDLE SAWKRRAIAE LIKKFQVSIL EQCFDKPVPL IPQSPLNNDA 420
  421 VIDNVNKALQ FALWLTEFYG SENETEALGE LRFLDSTSKN LLVDSFKKFV QGINSKTHVT 480
  481 RIVESLEKCC LSDTPSGRKS NVQPSTSQQQ DSAYTKEEMT TVHNTYSVNT KAQVLNGLSD 540
  541 TNSSGLLVDS KDSLSLQEIS CDEVDSSTLL SSSRNIGEGV TVKAVDPVPE KVNDAQQQQT 600
  601 VNEIEMASDA NQDTSSSASP EVAPSFSTDG WDSPTKSVAL PPGMQQIDEE ETTVADKDST 660
  661 PQPQARAETA WGSGDATPMP LPAPTNQYKV SGFGEAKVAK GFGQFAPTSS AYGGGGGRGG 720
  721 YGGGDRGGRG GYGGDRGGRG GYGGGDRGGR GGYGGDRGRG GYGGRGGRGG F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..254] deduced N/A No confident structure predictions are available.
    2 View Details [255..487] deduced N/A No confident structure predictions are available.
    3 View Details [488..694] MSA 11.234997 View MSA. No confident structure predictions are available.
    4 View Details [695..771] PSI-BLAST 4.221849 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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