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Protein Overview: him-3

General Information:
Name(s) found: him-3 / CE07625 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00001862 locus:him-3 status:Confirmed UniProt:G5EBG0 protein_id:CCD62007.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 291 amino acids

    Gene Ontology:
    Cellular Component: condensed nuclear chromosome [IDALink to PubMed article]
    Biological Process: sister chromatid cohesion [TASLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    homologous chromosome segregation [IMPLink to PubMed article]
    synaptonemal complex assembly [IMPLink to PubMed article]
    chromosome segregation [IMPLink to PubMed articleLink to PubMed article]
    mitosis [IEALink to PubMed article]
    Molecular Function: DNA binding [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKEQIVEH RESEIPIASQ WKATFPVDLE IEKNSEMFAL RYIKCASAFI LDRRGILDEK  60
   61 CFKTRTIDKL LVTAFQSSVP AAKRVSSTFD GLRDAIQQGY LREFAIVFYK KPNEEDINEV 120
  121 FAFRFAYGDE GEIFVSLNNG IDTNESSQEL LQAKFVDTDN TKQMFASTIK KLHRCIKKME 180
  181 PLPQGSDASF RVSYTEKAPK DYTPEGYLLS PMFYTLNQDI RKASIGIVCG GHHKIQMLAA 240
  241 SQYLKQDFDL DKTTTLNPNM SIMANQSKRK GRISRDSPYG LSQGITKKNK D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..291] FFAS03 6.79 The Mad2 spindle checkpoint protein possesses two distinct natively folded states

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.643047718552136 bayes_pls_golite062009
  • protein binding
    		•  0.123037566638484 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle