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Protein Overview: ndx-3

General Information:
Name(s) found: ndx-3 / CE07570 [WormBase]
Description(s) found:
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  • WBGene00003580 locus:ndx-3 status:Confirmed UniProt:Q23236 protein_id:AAA98017.1 [WormBase]
  • pir||T26648 hypothetical protein Y38A8.1 - Caenorhabditis elegans [NCBI NR]
  • gi|2833316|sp|Q23236.1|NDX3_CAEEL RecName: Full=Nudix hydrolase 3 [NCBI NR]
  • gi|17536993|ref|NP_494912.1| NuDiX family member (ndx-3) [Caenorhabditis elegans] [NCBI NR]
  • gi|1280151|gb|AAA98017.1| Nudix family protein 3 [Caenorhabditis elegans] [NCBI NR]
  • (Q23236) Hypothetical UPF0035 protein Y38A8.1 in chromosome II [Swiss-Prot]
  • Nudix hydrolase 3 OS=Caenorhabditis elegans GN=ndx-3 PE=2 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE07570 WBGene00003580 locus:ndx-3 status:Partially_confirmed SW:Q23236 protein_id:AAA98017.1 [wormpep150.fasta]
  • 07570 WBGene00003580 locus:ndx-3 status:Partially_confirmed SW:Q23236 protein_id:AAA98017.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • NuDiX hydrolase (ndx-3) [Caenorhabditis elegans]gi|1280151|gb|AAA98017.1| Nudix family protein 3 [Caenorhabditis elegans]gi|7509594|pir||T26648 hypothetical protein Y38A8.1 - Caenorhabditis elegansgi|2833316|sp|Q23236|YPAI_CAEEL Hypothetical UPF0035 pr [nrdb_11152004_Chlamydomonas]
  • locus:ndx-3 status:Partially_confirmed SW:Q23236 protein_id:AAA98017.1 [wormpep115.fasta.reversed]
  • CE07570 status:Predicted SW:Q23236 protein_id:AAA98017.1 [wormpep80.hongbin]
  • CE07570 WBGene00003580 locus:ndx-3 status:Partially_confirmed UniProt:Q23236 protein_id:AAA98017.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE07570 WBGene00003580 locus:ndx-3 status:Partially_confirmed UniProt:Q23236 protein_id:AAA98017.1| [wormORF-contam.fasta]
  • Nudix family protein 3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • NuDiX family member (ndx-3) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Nudix hydrolase 3 [nr-271106-contam.fasta]
  • CE07570 WBGene00003580 locus:ndx-3 status:Confirmed UniProt:Q23236 protein_id:AAA98017.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 188 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nucleoside diphosphate metabolic process [IEALink to PubMed article]
    Molecular Function: magnesium ion binding [IEALink to PubMed article]
    hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [IEALink to PubMed article]
    manganese ion binding [IEALink to PubMed article]
    hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVLIPLVTV DGRDSVLLTK RSIHLRSHRG EVCFPGGRMD PGETTTETAL RETFEEIGVN  60
   61 AESVEIWGHL KSVIRRQADF NVTPIVGYIS DERVLENLVV NSDEVQAVFT IPIDELIKKA 120
  121 GLTKFQSKRM KYTLPSFDST EFKVHHNAPN EYLHSTQRVW GLSGVMLHQA LTLLNPDVYK 180
  181 HDLIVKFF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..188] PSI-BLAST 20.154902 Coenzyme A pyrophosphatase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.49075808737475 bayes_pls_golite062009
  • hydrolase activity
    		•  0.129841789981243 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle