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Protein Overview: peb-1

General Information:
Name(s) found: peb-1 / CE07500 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00003968 locus:peb-1 status:Confirmed UniProt:H2KZM4 protein_id:CCD68942.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 427 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed articleLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    hindgut morphogenesis [IMPLink to PubMed article]
    organ morphogenesis [IMPLink to PubMed article]
    Molecular Function: DNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGLEKPGSS DISSSSTDTS AISPISVSSM PLSPDKEKKK ISFVRYNPDI PQIVTSFKGY  60
   61 QKLMYQGYRY NIYQIAPERN FKSWRCVCAK KMHDGQWCKC RAETTMDNKN ACTKGSHNHP 120
  121 PRHHVAEIEF IKSQLYSAAL ENPDHDAGDL VNQASMYLSD GVMFDNKESI KKSLVVARNK 180
  181 DGKPKKPRSK RMMKFEVDDD DENEYKMPKL ETDISCFLPF INNMVKVEPP FSHTPTIQIP 240
  241 QPIPTPIQHQ QQEQSNLLQP ATLNGMNNPW MGMEDHLAMI WAANAMLNPG LDVLSTIAAL 300
  301 SKHQQHVQGP SPQQAATAPT TASLSSNLSV SSFTPQMPKE ASIAIPAPLQ VLNLKDLKPL 360
  361 PPLANIQTSP VIQAANLLLP VAALKKDSST QTTEEIKVSQ CLTSGCGCRV IRICCCDEGV 420
  421 CRRTAAC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] Pfam 29.721246 No description for PF04500.7 was found. No confident structure predictions are available.
    2 View Details [120..310] deduced N/A No confident structure predictions are available.
    3 View Details [311..427] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle