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Protein Overview: CE07478

General Information:
Name(s) found: CE07478 [WormBase]
Description(s) found:
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  • WBGene00020436 status:Partially_confirmed UniProt:Q22419 protein_id:AAC24449.1 [WormBase]
  • pir||T34352 hypothetical protein T12A2.1 - Caenorhabditis elegans [NCBI NR]
  • gi|17555004|ref|NP_498363.1| hypothetical protein T12A2.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|1216313|gb|AAC24449.1| Hypothetical protein T12A2.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE07478 WBGene00020436 status:Partially_confirmed TR:Q22419 protein_id:AAC24449.1 [wormpep150.fasta]
  • 07478 WBGene00020436 status:Partially_confirmed TR:Q22419 protein_id:AAC24449.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • imidazolonepropionase (3H359) [Caenorhabditis elegans]gi|1216313|gb|AAC24449.1| Hypothetical protein T12A2.1 [Caenorhabditis elegans]gi|7507697|pir||T34352 hypothetical protein T12A2.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q22419 protein_id:AAC24449.1 [wormpep115.fasta.reversed]
  • CE07478 status:Partially_confirmed TR:Q22419 protein_id:AAC24449.1 [wormpep80.hongbin]
  • CE07478 WBGene00020436 status:Partially_confirmed UniProt:Q22419_CAEEL protein_id:AAC24449.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE07478 WBGene00020436 status:Partially_confirmed UniProt:Q22419_CAEEL protein_id:AAC24449.1| [wormORF-contam.fasta]
  • T12A2.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein T12A2.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE07478 WBGene00020436 status:Partially_confirmed UniProt:Q22419 protein_id:AAC24449.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 445 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: histidine catabolic process to glutamate and formamide [IEALink to PubMed article]
    Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [IEALink to PubMed article]
    hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRLLVKNLK QIVQIVDDDV TEFLIGDQMN NIKILNDSSN SLVILVDTNG KFSYIGNLNG  60
   61 AENKLKGEGV EMENLKIIDS NGGIAIPGFV DGHSHPVFSG DRVHEFAMKL AGATYMEVQQ 120
  121 AGGGIMFTTN KTREASEQDL RKDFEELAKK MLRSGTTTLE AKSGYGLNVD AEMKMLRVLA 180
  181 TENPNIPLEV SATFCGAHAV PKGSTEYEQT RMICEELIPK IEDEKRNGGL KNVENIDVFC 240
  241 EKGVFEVESR LLAKSIQFLL IYSQKILKRG QEAGMAVNFH AEELKYIGGV EMGAKIGARA 300
  301 MSHLEEISDK GIRGMAQAGS VAVLLPSTAF ILRLTPPPAR KLIENNVIVA LGSDFNPNAY 360
  361 CLAMPMIMHF ACVTMKLSMP EALTAATLNS AHSIGRGKSH GAIAKGRNAD FVILSANSWE 420
  421 HIIYRIAAHH DVINYVIKNG NVVDI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..445] PSI-BLAST 56.0 No description for 2bb0A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  2.17584977880576 bayes_pls_golite062009
  • catalytic activity
    		•  1.70199291046899 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.882933203153461 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle