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Protein Overview: ipla-1

General Information:
Name(s) found: ipla-1 / CE07393 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00019747 locus:ipla-1 status:Confirmed UniProt:Q21478 protein_id:CCD70552.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 765 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: metal ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSPPTSPT PIPSIDSNFM ISPKKSRSKS VPNARKILND LVETTERNLE APYRSIMWQK  60
   61 YIFDRPKVTE LKCSEVRWFF QEPKGTLWNP FNGRDSIMLE IKYRKEKGIE LDEAMQEIYD 120
  121 ESLTHYKMEM KDEPEIENGN IGMEQEKPMV VVMNGQYKVN KDNSKIDPIY WKDDSKEIRR 180
  181 GSWFSPDYQP LEMPLSDQIE KNHLQCFRNQ MIPEGTTVFS KSETSNKPVL AELHVDGYDI 240
  241 RWSSVIDISL HQKGNAILRY LWAKSTPLRR GYEKEADWND AAAEISHLIL VVHGIGQKGY 300
  301 ENLIAQNANQ VRDGVVSAME KVYPEEKSRP MFLPVEWRSA LKLDNGLTDN ITIPKMSSMR 360
  361 ASLNSTAMDV MYYQSPLFRT EIVRGVVSQL NRTYKLFKAN NPQFNGHVSV FGHSLGSVIC 420
  421 YDVLTQYSPL MLFDKYVTKS IDEYLKRDDT NASEEARKAL EAMKLAREQL RDNLEGGIHK 480
  481 LLVTKEEQLE FKVKYLFAVG SPLGVFLTMR GGESTDLLSK ATNVERVFNI FHPYDPVAYR 540
  541 LEPFFAPEYR HIRPIKLFSN TDLRARASYE NLPLDVYKHY LKKLKNLNKA KKNKDDKTAD 600
  601 ARSGGDDENE DEDECDSDED ARSGCSSPRS MTPPPFETAA ANAAAAAKET KAVKKGWFSF 660
  661 GTSSNPKKTQ STASLGSVNA TSTENIEFAK EAAEELPLAE KILGSGVRVP HRIDFQLQPA 720
  721 LTEKSYWSVL KSHFAYWTNA DLALFLANVL YCKPLKPEEA KPTWA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..71] deduced N/A No confident structure predictions are available.
    2 View Details [72..279] MSA 2.097979 View MSA. No confident structure predictions are available.
    3 View Details [280..572] FFAS03 1.0 Lipase L1
    4 View Details [573..627] deduced N/A No confident structure predictions are available.
    5 View Details [628..765] MSA 7.093991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle