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Protein Overview: spc-1

General Information:
Name(s) found: spc-1 / CE07373 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00004951 locus:spc-1 status:Partially_confirmed UniProt:G4S034 protein_id:CCD64602.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 2427 amino acids

    Gene Ontology:
    Cellular Component: proteinaceous extracellular matrix [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed articleLink to PubMed article]
    regulation of locomotion [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    embryonic body morphogenesis [IMPLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    cell adhesion [IEALink to PubMed article]
    blood coagulation [IEALink to PubMed article]
    positive regulation of multicellular organism growth [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    Molecular Function: calcium ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSNDTHAP PEPVLEVPPP QEIRILETAD DIHQRRQEVL GHYSIFKDHS QTKRDRLEEA  60
   61 RQFQYFKRDA DELNVWILEK LQTAQEENFR DPSNLQAKIQ KHEAFEAEVQ AHAKTIANLD 120
  121 KTGNAMIQHN HFASEHIKKR LEELHALWDK LFFKLKDKGI KLQQALKLLH FIRQCDEILY 180
  181 WIREKETYVT AEDMGMDLEH VEILQRKFDD FLKELGNHQY RINEINQAAD KLVEEGHSEH 240
  241 DQIYKKRDDV NDAWHRLNTL AATRKEGLFG AHQVQRFNRD ADETLAWIGE KDLALSSDDY 300
  301 GRDLNNVQAL QRKHEGTERD LAALEGKMLQ LEKEAHKLAE THPDRAEAIH QKNDDTKAAW 360
  361 NALKEKAQHR KDGLERSFQL HRFLADYRDL ISWIGDMKAV IGADELAKDV AGAEALLESH 420
  421 QEHKGEIDAR ADSFNQTASA GQKLVEMGIP ESPEVQEKLE KLDHEKSSLL GLWEERRILY 480
  481 EQCMDLQLFY RDTEQAETWM NKQEAFLANT DLGDSLDSVE HLIKKHEDFE KSLAAQEEKI 540
  541 NALDEFATKL IQGQHYAADD VAERRQALLD RRRRLLDRAR QRGNALKESY KRQTFDRDCD 600
  601 EMVSWITEKL STARDDSYLD PTNIRGKLQK HINFEQELKA NENRLDDIRS TGEQIIDSGH 660
  661 FAADHIGDRL RQVNNLWNEL VDATNKKGAK LREAGNEQQF NRNIEDVEAW LSELEGQVAS 720
  721 EDYGKDLVSV QNLQKKIGLI ESDFNAHNDR VDGIKQLAQQ FQEEEHFNAP VIVRKQENLQ 780
  781 QRYNALRDPL EKRKRKLGES HQGNQLFRDI EDELAWIREK EQVAGSTNRG RDLIGVQNLI 840
  841 KKQQALIAEI ANHDSQIESV SSAANDMIQQ GHFLAPEIRD KLAQLRDNWR ILKSKAEKRR 900
  901 TDLDDSLQAH QYLSDANEAD AWMSEKEPIV GSTDYGKDED SAEALLKKHR ALLSDLEAFK 960
  961 GTIEDLRKQA SQCKYQEQPM GQLGRDCVLA LYDYQEKSPR EVSMKKGDVL TLLNASNRDW1020
 1021 WKVEVNDRQG FVPAAYVKRI EPGTAQQHAQ QQVNSIGGKQ SEIEDKYQRL MMLGETRKRK1080
 1081 LEEACKGYQL LREANDLAEW IKSREAVAAQ QEIGTDLEQV EVLQKKFDDF KGDLKANEVR1140
 1141 LQEMNQIATA LTSVGQTETA VRIRQQIEDL NARWRALEEQ TEQREQQLGS AHEVQRFHRD1200
 1201 VDETRDWIQE KDDALDSEDF GRDLRSVQAL QRKHEGVERD LAALGDKIKS LDEKANRLRQ1260
 1261 SHPEAAEQIY DLQRELNEQW NRLTSKANNR KEKLLDSYDY QRFLSDYRDL MQWIASMNQL1320
 1321 VSSQELANDV TGAEALLERH QEYRTEIDSR AATFQAFDQF GNQLLNSHHY AAGDIENRLQ1380
 1381 GVNEARKGLE DAWVARRNIL DQCLELQLFY RDCEQADTWM SAREAFLAQE DPSGDNVESL1440
 1441 IKKHEDFDKA INTQEEKIKG LKLFAESLIK NNHYDSPAVT RKRDQILDRW NGLKEALIQK1500
 1501 RFKLGESQTL QQFSRDADEI ENWMTEKFQI AQEENYRDPT NIQQKHQKQQ AFEAELHANS1560
 1561 DRIAAIIQAG NNLIENAKCG GGEAAVSARL KALNDQWDLL VKTTTEKSYR LKEANKQKSF1620
 1621 MAAVKDLEFW LGEVEILLQS EDYGKDLASV ENLLKKHSLL EADIVAHQDR VGEMNEQADS1680
 1681 LLENDQFQGQ QIAERRKLIA DRYDGVKKMA TDRRDKLSKA LNVHQFFRDI DDEESWIKEK1740
 1741 KLLVSSDDYG RDLPGVQNLR RKHRRIDTEL ASHEPQVSLV KLKGEELLRS AAEAGVGEDQ1800
 1801 IKKRMEDLEQ SWGQIRDLTG NRHQRLDESE AFQAFLGDVE EEEAWMNEKQ QILGSDNFGE1860
 1861 NMAGVQGLLK KHDTFQVDLE LHKQRVADLI NKGDTLIHNG NHHAPHIKQR CDQLRARLIE1920
 1921 IESMAEGRLA KLRDNSAYLQ FMWKCDVVES WIAEKEQQVR SEDFGRDLSS VQILLTKQEA1980
 1981 FDAGLNAFEH EGIQRITELK DQLVSSEHQQ SPAIEKRHTN VIQRWQNLLA HSEARRQKLL2040
 2041 KMQQQFKQIE ELYLAFAKKA STFNSWFENA EEDLTDPVRC NSLEEIRALR DAHGEFQRSL2100
 2101 SSAEEDFRQL QDLDRRIKSF NVGPNPYTWF TMDALEDTWR NLQRIIKERE QELAREHQRQ2160
 2161 EENDKLRREF AKLANAFHAW LTNTRQEMME AGGTLEEQLD AVERKAKEIK ANKGQLRQIE2220
 2221 EKGAMLERNL ILDNRYTEHS TVGIAQAWDQ LDQLAMRMQH NLEQQIQARN QSGVSEEALR2280
 2281 EFSMMFKHFD KEKTGRLDHQ QFKSCLRALG YDLPMVDEGQ PEPEFQRILD IVDPNRDGYV2340
 2341 TLQEYMAFMI SKETENIQSS EEIEMAFRAL SKEFRPYVTA EELYANLTPE QAEFCIRRMK2400
 2401 PYMDAISGRS IQGGLDYEQF VHALFQS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle