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Protein Overview: CE07369

General Information:
Name(s) found: CE07369 [WormBase]
Description(s) found:
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  • WBGene00019612 status:Partially_confirmed UniProt:Q21407 protein_id:AAB53873.1 [WormBase]
  • pir||T16609 hypothetical protein K10B3.6 - Caenorhabditis elegans [NCBI NR]
  • gi|71993731|ref|NP_001024784.1| hypothetical protein K10B3.6 [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_508533.1| glycerophosphoryl diester phosphodiesterase family member (XD726) [Caenorhabditis elegans] [NCBI NR]
  • gi|1206045|gb|AAB53873.1| Hypothetical protein K10B3.6a [Caenorhabditis elegans] [NCBI NR]
  • Putative glycerophosphocholine phosphodiesterase GPCPD1 homolog K10B3.6 OS=Caenorhabditis elegans GN=K10B3.6 PE=2 SV=1 [Swiss-Prot]
  • Putative glycerophosphodiester phosphodiesterase 5 homolog K10B3.6 OS=Caenorhabditis elegans GN=K10B3.6 PE=2 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE07369 WBGene00019612 status:Partially_confirmed TR:Q21407 protein_id:AAB53873.1 [wormpep150.fasta]
  • 07369 WBGene00019612 status:Partially_confirmed TR:Q21407 protein_id:AAB53873.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • glycerophosphoryl diester phosphodiesterase family member (XD726) [Caenorhabditis elegans]gi|1206045|gb|AAB53873.1| Hypothetical protein K10B3.6a [Caenorhabditis elegans]gi|7505694|pir||T16609 hypothetical protein K10B3.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q21407 protein_id:AAB53873.1 [wormpep115.fasta.reversed]
  • CE07369 status:Partially_confirmed TR:Q21407 protein_id:AAB53873.1 [wormpep80.hongbin]
  • CE07369 WBGene00019612 status:Partially_confirmed UniProt:Q21407_CAEEL protein_id:AAB53873.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE07369 WBGene00019612 status:Partially_confirmed UniProt:Q21407_CAEEL protein_id:AAB53873.1| [wormORF-contam.fasta]
  • K10B3.6a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein K10B3.6a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE07369 WBGene00019612 status:Partially_confirmed UniProt:Q21407 protein_id:AAB53873.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 757 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: glycerol metabolic process [IEALink to PubMed article]
    Molecular Function: glycerophosphodiester phosphodiesterase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHRKLAAFF SCFASRRFSF SLYSLYILFC AGAFPIPRSP SSFFLTISFS SSILPFSSIQ  60
   61 KNYWLVTEKK NQKKKAFGGS EQNEANPPKL LVYMDQDYKA HFKVFCSEVR EWEKIHVVGS 120
  121 LPVLGEWNPR KSFPLTKSTD EENTFHAIVS VPSSIKEFNF RYIRVMYLDP SENNTSEPIM 180
  181 VLSKWETFNN ARTCLIGVES QDGVARKNIT DQFGSYSGKT QITDGWILNE KESVVYFRIH 240
  241 GEALKFFAKS YANKEYRLKV EPFDVRYSEI DGDDVVNLPT PSLPCFSNTD LSVLTREDPI 300
  301 FGDQYFNGSV FRNDQDYLVF RTRTVSLQNL AFRIEFYHGE KRCALSYVLP SSMSGTHGAT 360
  361 VSPVIGLSSA PVGHINVNYM IVKRNKYTDQ NLDIDSMKTT FGRYWRKRNR MLQIGHRGMG 420
  421 SSYTKNIGQR ENTIFSLNEA ARRGADYVEM DVQLTKDLKT VVYHDFHVLV AVAGRDSPSS 480
  481 TPTAAGENKS LHEIAIKDLT LAQLNLLHFE HISRANGSSA ESPVALSVTP SKTETDELHV 540
  541 PFPSLAQVLR HVDENVGLNI EIKYPMYMQD GSHECQGYFE QNKFVDIILA EVAEHAGNRR 600
  601 IIFSCFEPDI CTMITKKQHK YPVSFLVVGA TNRYMPFQDI RSDCSKIAAN FAAGCELLGV 660
  661 NFHSEELLID QKPIEIAEKY GLIKFVWGDD LNSKEVQKHF RDEMNVDGLI FDRIGEDEVL 720
  721 KQNVFVVENH NRSSLFARSQ HNSRSPSMSR RCMSTVE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..193] PSI-BLAST 33.30103 Cyclomaltodextrin glycanotransferase, domain D; Cyclodextrin glycosyltransferase, C-terminal domain; Cyclodextrin glycosyltransferase
    2 View Details [194..325] deduced N/A No confident structure predictions are available.
    3 View Details [326..757] PSI-BLAST 57.522879 Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.400484690033704 bayes_pls_golite062009
  • protein binding
    		•  0.135246686415482 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.322782393124324 bayes_pls_golite062009
  • hydrolase activity
    		•  0.114597543302679 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.10444517300189 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.0391669406455814 bayes_pls_golite062009
  • phosphoric diester hydrolase activity
    		•  0.0229452028027644 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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