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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE07369
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHRKLAAFF SCFASRRFSF SLYSLYILFC AGAFPIPRSP SSFFLTISFS SSILPFSSIQ  60
   61 KNYWLVTEKK NQKKKAFGGS EQNEANPPKL LVYMDQDYKA HFKVFCSEVR EWEKIHVVGS 120
  121 LPVLGEWNPR KSFPLTKSTD EENTFHAIVS VPSSIKEFNF RYIRVMYLDP SENNTSEPIM 180
  181 VLSKWETFNN ARTCLIGVES QDGVARKNIT DQFGSYSGKT QITDGWILNE KESVVYFRIH 240
  241 GEALKFFAKS YANKEYRLKV EPFDVRYSEI DGDDVVNLPT PSLPCFSNTD LSVLTREDPI 300
  301 FGDQYFNGSV FRNDQDYLVF RTRTVSLQNL AFRIEFYHGE KRCALSYVLP SSMSGTHGAT 360
  361 VSPVIGLSSA PVGHINVNYM IVKRNKYTDQ NLDIDSMKTT FGRYWRKRNR MLQIGHRGMG 420
  421 SSYTKNIGQR ENTIFSLNEA ARRGADYVEM DVQLTKDLKT VVYHDFHVLV AVAGRDSPSS 480
  481 TPTAAGENKS LHEIAIKDLT LAQLNLLHFE HISRANGSSA ESPVALSVTP SKTETDELHV 540
  541 PFPSLAQVLR HVDENVGLNI EIKYPMYMQD GSHECQGYFE QNKFVDIILA EVAEHAGNRR 600
  601 IIFSCFEPDI CTMITKKQHK YPVSFLVVGA TNRYMPFQDI RSDCSKIAAN FAAGCELLGV 660
  661 NFHSEELLID QKPIEIAEKY GLIKFVWGDD LNSKEVQKHF RDEMNVDGLI FDRIGEDEVL 720
  721 KQNVFVVENH NRSSLFARSQ HNSRSPSMSR RCMSTVE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle