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Protein Overview: cogc-6

General Information:
Name(s) found: cogc-6 / CE07351 [WormBase]
Description(s) found:
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  • WBGene00019481 locus:cogc-6 Conserved oligomeric Golgi complex subunit 6 status:Partially_confirmed UniProt:Q21270 protein_id:CCD64764.1 [WormBase]
  • pir||C89124 protein K07C11.9 [imported] - Caenorhabditis elegans [NCBI NR]
  • gi|25089899|sp|Q21270.1|COG6_CAEEL RecName: Full=Conserved oligomeric Golgi complex subunit 6; Short=COG complex subunit 6; AltName: Full=Component of oligomeric Golgi complex 6 [NCBI NR]
  • gi|17562348|ref|NP_505118.1| Conserved Oligomeric Golgi (COG) Component family member (cogc-6) [Caenorhabditis elegans] [NCBI NR]
  • gi|1255829|gb|AAA96179.1| Hypothetical protein K07C11.9 [Caenorhabditis elegans] [NCBI NR]
  • Conserved oligomeric Golgi complex subunit 6 OS=Caenorhabditis elegans GN=cogc-6 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE07351 WBGene00019481 status:Partially_confirmed SW:Q21270 protein_id:AAA96179.1 [wormpep150.fasta]
  • 07351 WBGene00019481 status:Partially_confirmed SW:Q21270 protein_id:AAA96179.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • component oligomeric golgi complex 6 (73.6 kD) (5I700) [Caenorhabditis elegans]gi|1255829|gb|AAA96179.1| Hypothetical protein K07C11.9 [Caenorhabditis elegans]gi|25396556|pir||C89124 protein K07C11.9 [imported] - Caenorhabditis elegansgi|25089899|sp|Q2 [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed SW:Q21270 protein_id:AAA96179.1 [wormpep115.fasta.reversed]
  • CE07351 status:Partially_confirmed TR:Q21270 protein_id:AAA96179.1 [wormpep80.hongbin]
  • CE07351 WBGene00019481 locus:cogc-6 status:Partially_confirmed UniProt:Q21270 protein_id:AAA96179.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE07351 WBGene00019481 locus:cogc-6 status:Partially_confirmed UniProt:Q21270 protein_id:AAA96179.1| [wormORF-contam.fasta]
  • CE07351 WBGene00019481 locus:cogc-6 status:Partially_confirmed SW:Q21270 protein_id:AAA96179.1 [wormpep160-contam.fasta]
  • Putative conserved oligomeric Golgi complex component 6 [nr-271106-contam.fasta]
  • Conserved Oligomeric Golgi (COG) Component family member (cogc-6) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein K07C11.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE07351 WBGene00019481 locus:cogc-6 status:Partially_confirmed UniProt:Q21270 protein_id:CCD64764.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE07351 WBGene00019481 locus:cogc-6 status:Partially_confirmed UniProt:Q21270 protein_id:CCD64764.1 Conserved oligomeric Golgi complex subunit 6 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 642 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: gonad morphogenesis [IMPLink to PubMed article]
    regulation of cell migration [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVIDKTSSA VNPLREKVTT ACAKKLYNDK DCIKIADFIT PLVEDMNLDS NVDRKLHNKL  60
   61 ERYELRLNKE YLSEFEKINN IVQKFDELCV KMNSTCTNLS KQMETVKFKS VDLVQKTASL 120
  121 KEKKASIESR CNMINEFLEN YSLSSEELRE LDECEQSGHL SEFFFKVLER CHEIRENCRN 180
  181 MVQEQGHLAA FEVMEKMQKI DERSHAIICN NLKREFQNLT VDSHQKKQIL SKAFKIISQN 240
  241 DAVFQLAIDQ YISSRSQELL NQFVEINKMA VQMPEGLAEP LKAVGDMLTS IHELTEQEKQ 300
  301 LFSSICSAEN LPIVLDECLK SLTSPFKIRV EQLLSTEKNA ITIFKMGNIL IFYANKFETL 360
  361 IRKDSYFTIM LADLVKTVRQ VCIAGINHHV DGLMRKMTSP HYDLLPVPEV RQCLSLYHGL 420
  421 ISIAVKTGDL NLLLEPERIY EYVLEPLIQT VQLSATRLKS DIEVSVFTIN CLTVIRSAIS 480
  481 EISAFKKKIE MIDAMIEGNS DVLVSVQVSE MLEKSGILEL YQKFNAVNPA EKKPLSTLPG 540
  541 LESTTVGEAI VMFTQYLHNH ASSDHTYDID QQILASEERQ RIRERNTLEF LKVYKMIVDR 600
  601 LGNPTNGYEN LHYLPIEHVE SVLKFEKEKE NTPSSNESES LA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..336] PSI-BLAST 16.69897 Heavy meromyosin subfragment
    2 View Details [337..642] FFAS03 1.04 No description for 2pftA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle