| Protein: | cogc-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 642 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cogc-6.
| Description | E-value | Query Range |
Subject Range |
|
|
560.0 | [0..31] | [623..488] |
|
Region A: Residues: [1-336] |
1 11 21 31 41 51
| | | | | |
1 MSVIDKTSSA VNPLREKVTT ACAKKLYNDK DCIKIADFIT PLVEDMNLDS NVDRKLHNKL 60
61 ERYELRLNKE YLSEFEKINN IVQKFDELCV KMNSTCTNLS KQMETVKFKS VDLVQKTASL 120
121 KEKKASIESR CNMINEFLEN YSLSSEELRE LDECEQSGHL SEFFFKVLER CHEIRENCRN 180
181 MVQEQGHLAA FEVMEKMQKI DERSHAIICN NLKREFQNLT VDSHQKKQIL SKAFKIISQN 240
241 DAVFQLAIDQ YISSRSQELL NQFVEINKMA VQMPEGLAEP LKAVGDMLTS IHELTEQEKQ 300
301 LFSSICSAEN LPIVLDECLK SLTSPFKIRV EQLLST
|
| Detection Method: |  |
| Confidence: | 16.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [337-642] |
1 11 21 31 41 51
| | | | | |
1 EKNAITIFKM GNILIFYANK FETLIRKDSY FTIMLADLVK TVRQVCIAGI NHHVDGLMRK 60
61 MTSPHYDLLP VPEVRQCLSL YHGLISIAVK TGDLNLLLEP ERIYEYVLEP LIQTVQLSAT 120
121 RLKSDIEVSV FTINCLTVIR SAISEISAFK KKIEMIDAMI EGNSDVLVSV QVSEMLEKSG 180
181 ILELYQKFNA VNPAEKKPLS TLPGLESTTV GEAIVMFTQY LHNHASSDHT YDIDQQILAS 240
241 EERQRIRERN TLEFLKVYKM IVDRLGNPTN GYENLHYLPI EHVESVLKFE KEKENTPSSN 300
301 ESESLA
|
| Detection Method: | |
| Confidence: | 1.04 |
| Match: | 2pftA |
| Description: | No description for 2pftA was found. |
