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Protein Overview: CE07190

General Information:
Name(s) found: CE07190 [WormBase]
Description(s) found:
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  • WBGene00018088 locus:trpp-4 status:Confirmed UniProt:Q20100 protein_id:CCD68600.1 [WormBase]
  • pir||T29312 hypothetical protein F36D4.2 - Caenorhabditis elegans [NCBI NR]
  • gi|17560616|ref|NP_505435.1| hypothetical protein F36D4.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|1245686|gb|AAA93486.1| Hypothetical protein F36D4.2 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE07190 WBGene00018088 synbindin TRS23 family status:Partially_confirmed TR:Q20100 protein_id:AAA93486.1 [wormpep150.fasta]
  • 07190 WBGene00018088 synbindin TRS23 family status:Partially_confirmed TR:Q20100 protein_id:AAA93486.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • synbindin (5J881) [Caenorhabditis elegans]gi|1245686|gb|AAA93486.1| Hypothetical protein F36D4.2 [Caenorhabditis elegans]gi|7500620|pir||T29312 hypothetical protein F36D4.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • synbindin TRS23 family status:Partially_confirmed TR:Q20100 protein_id:AAA93486.1 [wormpep115.fasta.reversed]
  • CE07190 status:Predicted TR:Q20100 protein_id:AAA93486.1 [wormpep80.hongbin]
  • CE07190 WBGene00018088 synbindin TRS23 family status:Partially_confirmed UniProt:Q20100_CAEEL protein_id:AAA93486.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE07190 WBGene00018088 synbindin TRS23 family status:Partially_confirmed UniProt:Q20100_CAEEL protein_id:AAA93486.1| [wormORF-contam.fasta]
  • Hypothetical protein F36D4.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F36D4.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE07190 WBGene00018088 synbindin TRS23 family status:Confirmed UniProt:Q20100 protein_id:AAA93486.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE07190 WBGene00018088 synbindin TRS23 family status:Confirmed UniProt:Q20100 protein_id:CCD68600.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE07190 WBGene00018088 locus:trpp-4 status:Confirmed UniProt:Q20100 protein_id:CCD68600.1 [wormpep246-ecoli-contam.fasta]
  • TRansport Protein Particle OS=Caenorhabditis elegans GN=trpp-4 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 224 amino acids

    Gene Ontology:
    Cellular Component: cis-Golgi network [IEALink to PubMed article]
    Biological Process: ER to Golgi vesicle-mediated transport [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNHIQHLFI INRAGSLIYS WEARTETPEV EKTYEWPIDV HLEEVDQKAV VVFGEKDGIK  60
   61 LRYYVKSVNG ETVSGTRLQL GAQQVNVLEY LQEEDHYPVT VKFAAPTVST NEKIILSSMF 120
  121 HSLFTIAVQL SPCQKSSGVE VLETTQFKLF CLQSRTGVKF VVITSAASNI AADSLLSKMY 180
  181 ELYTDFALKN PFYSIDMPIR AQKFDEAIKT LLERAEKNNG AVTF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..224] PSI-BLAST 80.522879 No description for 2j3tD was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle