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Protein Overview: CE06739

General Information:
Name(s) found: CE06739 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00015282 status:Confirmed UniProt:Q17539 protein_id:CCD62333.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 656 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEALink to PubMed article]
    ubiquinone biosynthetic process [IEALink to PubMed article]
    Molecular Function: catalytic activity [IEALink to PubMed article]
    methyltransferase activity [IEALink to PubMed article]
    2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPNEPQSF TDPAYWKNFF AKRKSPFEWY GDYNSLSNVI DKYLKPKDTF LQLGCGNSEL  60
   61 ATQLYDNGFH CIHSIDVEPS VIATQIRKNK ERLGMTFETG DAANLSMADE AHTIVIDKGT 120
  121 LDALLPPSAS ESDEALVTKM FEEVHRVLAS GGRYIIVTLA QPHITEFWIN HFYPLKQYIL 180
  181 RVQKVENKAS GFPMPVFCFI ATKMRAPMPN PLPLEVLRSS SIRTDRIDST DELKDSIRGE 240
  241 QELSQFIYLC SKKLDSEVSI DFHGADPSLG PRYRICVVDN PEAKKIDTFA AFVVPIGRDS 300
  301 EWLFASPKGR KALRVQCGRE RLAIVFLNRN QKYEKGMDGV KSDIGHFVGM LDVRQDNTGN 360
  361 YEILSIGGVD VKRTVSTGRS DINGGWSVEE VTVEGNQTRR LVFLNTMNLV QSEAYLKTGK 420
  421 KKQTVIDLDQ LACDFHRMMI GSLAISPQQP LAKNDAQCKM AVLGLGGGLL TAYLVRHFKK 480
  481 AHVTAVELDP EVLKIANSHF SFPHSDARID VVIQDALIHL QETAKKPEEE KYDVIFVDVS 540
  541 GSQNAALQCP PSAFLTPEAL GNMKNSVKEQ GMISLNLVTR DSEFGKSIKK NIAEYFPTLY 600
  601 TVLSFEDVNE IIIGLKTPKN TIKPVVPQKL INTVRKDIGS YDEVVGAISN IRMVDY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..252] PSI-BLAST 25.522879 No description for 2pxxA was found.
    2 View Details [253..336] deduced N/A No confident structure predictions are available.
    3 View Details [337..656] PSI-BLAST 43.045757 X-RAY STRUCTURE OF SPERMIDINE SYNTHASE FROM ARABIDOPSIS THALIANA GENE AT1G23820

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • transferase activity
    		•  0.569065423404044 bayes_pls_golite062009
  • catalytic activity
    		•  0.486907672100804 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.155495931533276 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.145822362574272 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle