| Protein: | CE06739 |
| Organism: | Caenorhabditis elegans |
| Length: | 656 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06739.
| Description | E-value | Query Range |
Subject Range |
|
|
409.0 | [0..4] | [654..5] |
|
Region A: Residues: [1-252] |
1 11 21 31 41 51
| | | | | |
1 MSAPNEPQSF TDPAYWKNFF AKRKSPFEWY GDYNSLSNVI DKYLKPKDTF LQLGCGNSEL 60
61 ATQLYDNGFH CIHSIDVEPS VIATQIRKNK ERLGMTFETG DAANLSMADE AHTIVIDKGT 120
121 LDALLPPSAS ESDEALVTKM FEEVHRVLAS GGRYIIVTLA QPHITEFWIN HFYPLKQYIL 180
181 RVQKVENKAS GFPMPVFCFI ATKMRAPMPN PLPLEVLRSS SIRTDRIDST DELKDSIRGE 240
241 QELSQFIYLC SK
|
| Detection Method: |  |
| Confidence: | 25.522879 |
| Match: | 2pxxA |
| Description: | No description for 2pxxA was found. |
|
Region A: Residues: [253-336] |
1 11 21 31 41 51
| | | | | |
1 KLDSEVSIDF HGADPSLGPR YRICVVDNPE AKKIDTFAAF VVPIGRDSEW LFASPKGRKA 60
61 LRVQCGRERL AIVFLNRNQK YEKG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [337-656] |
1 11 21 31 41 51
| | | | | |
1 MDGVKSDIGH FVGMLDVRQD NTGNYEILSI GGVDVKRTVS TGRSDINGGW SVEEVTVEGN 60
61 QTRRLVFLNT MNLVQSEAYL KTGKKKQTVI DLDQLACDFH RMMIGSLAIS PQQPLAKNDA 120
121 QCKMAVLGLG GGLLTAYLVR HFKKAHVTAV ELDPEVLKIA NSHFSFPHSD ARIDVVIQDA 180
181 LIHLQETAKK PEEEKYDVIF VDVSGSQNAA LQCPPSAFLT PEALGNMKNS VKEQGMISLN 240
241 LVTRDSEFGK SIKKNIAEYF PTLYTVLSFE DVNEIIIGLK TPKNTIKPVV PQKLINTVRK 300
301 DIGSYDEVVG AISNIRMVDY
|
| Detection Method: | |
| Confidence: | 43.045757 |
| Match: | 1xj5A |
| Description: | X-RAY STRUCTURE OF SPERMIDINE SYNTHASE FROM ARABIDOPSIS THALIANA GENE AT1G23820 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transferase activity | 0.569065423404044 | bayes_pls_golite062009 |
| catalytic activity | 0.486907672100804 | bayes_pls_golite062009 |
| methyltransferase activity | 0.155495931533276 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.145822362574272 | bayes_pls_golite062009 |
