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Protein Overview: her-1

General Information:
Name(s) found: her-1 / CE06617 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00001842 locus:her-1 Protein her-1 status:Partially_confirmed UniProt:P34704 protein_id:CAA94804.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 175 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: male sex determination [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYLPIFVFL GSFGYTETTL TKELIKDAAE KCCTRNRQEC CIEIMKFGTP IRCGYDRDPK  60
   61 LPGYVYKCLQ NVLFAKEPKK KINLDDSVCC SVFGNDQNDS GRRCENRCKN LMTSPSIDAA 120
  121 TRLDSIKSCS LLDNVLYKCF EKCRSLRKDG IKIEVLQFEE YCNATFIQKR TFRGV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..175] PSI-BLAST 65.69897 Crystal Structure of C. elegans HER-1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.52

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle