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Protein Overview: CE06574

General Information:
Name(s) found: CE06574 [WormBase]
Description(s) found:
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  • WBGene00013862 locus:wdr-5.3 WD repeat-containing protein wdr-5.3 status:Partially_confirmed UniProt:Q23256 protein_id:CAA98293.1 [WormBase]
  • pir||T27513 hypothetical protein ZC302.2 - Caenorhabditis elegans [NCBI NR]
  • gi|72001544|ref|NP_001024299.1| hypothetical protein ZC302.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|3881391|emb|CAA98293.1| C. elegans protein ZC302.2a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|3123143|sp|Q23256.1|YH92_CAEEL RecName: Full=Uncharacterized WD repeat-containing protein ZC302.2 [NCBI NR]
  • ref|NP_505737.1| WD repeat domain 5B (54.5 kD) (5L219) [Caenorhabditis elegans] [NCBI NR]
  • Uncharacterized WD repeat-containing protein ZC302.2 OS=Caenorhabditis elegans GN=ZC302.2 PE=2 SV=1 [Swiss-Prot]
  • WD repeat-containing protein wdr-5.3 OS=Caenorhabditis elegans GN=wdr-5.3 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE06574 WBGene00013862 guanine nucleotide binding protein status:Partially_confirmed SW:Q23256 protein_id:CAA98293.1 [wormpep150.fasta]
  • 06574 WBGene00013862 guanine nucleotide binding protein status:Partially_confirmed SW:Q23256 protein_id:CAA98293.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • WD repeat domain 5B (54.5 kD) (5L219) [Caenorhabditis elegans]gi|3881391|emb|CAA98293.1| Hypothetical protein ZC302.2 [Caenorhabditis elegans]gi|7510677|pir||T27513 hypothetical protein ZC302.2 - Caenorhabditis elegansgi|3123143|sp|Q23256|YH92_CAEEL Hy [nrdb_11152004_Chlamydomonas]
  • guanine nucleotide binding protein status:Partially_confirmed SW:Q23256 protein_id:CAA98293.1 [wormpep115.fasta.reversed]
  • CE06574 guanine nucleotide binding protein status:Predicted SW:Q23256 protein_id:CAA98293.1 [wormpep80.hongbin]
  • CE06574 WBGene00013862 guanine nucleotide binding protein status:Partially_confirmed UniProt:YH92_CAEEL protein_id:CAA98293.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE06574 WBGene00013862 guanine nucleotide binding protein status:Partially_confirmed UniProt:YH92_CAEEL protein_id:CAA98293.1| [wormORF-contam.fasta]
  • ZC302.2a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical WD repeat protein ZC302.2 [nr-271106-contam.fasta]
  • Hypothetical protein ZC302.2a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE06574 WBGene00013862 locus:swd-3.3 guanine nucleotide binding protein status:Partially_confirmed UniProt:Q23256 protein_id:CAA98293.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE06574 WBGene00013862 locus:wdr-5.3 guanine nucleotide binding protein status:Partially_confirmed UniProt:Q23256 protein_id:CAA98293.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE06574 WBGene00013862 locus:wdr-5.3 status:Partially_confirmed UniProt:Q23256 protein_id:CAA98293.1 WD repeat-containing protein wdr-5.3 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 501 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: meiotic chromosome segregation [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPERQETIS PKNVPFQPVP TPNQQSLQSR MLESNQAVPD AFQKVAAWNH YNAVATPPIG  60
   61 VPQTARPPSN QSPHPNPPGY PYQSHQQQFH PLAIAFQQPF GLPQQVIYPP PPPGFTPHRV 120
  121 QVSPVGLLGP PGFFPQFAGS TTSQGNPSEV SVRTKSAEGT TGPIAPSITT KPTSTIQVAP 180
  181 PRDPVAPTTS SSGITKKPEN GEFSLVKTIS GHTKSVSVIK FSYCGKYLGT GSADKQIKVW 240
  241 NTVDMTYLQT LASHQLGIND FSWSSNSQFI ASASDDTTVK IFDVISGACL RTMRGHTNYV 300
  301 FCCSFNPQSS LIASAGFDET VRVWDFKTGL CVKCIPAHSD PITSISYNHD GNTMATSSYD 360
  361 GCIRVWDAAS GSCLKTLVDT DHAPVTFVCF SPNGKYLLSA QLDSSLKLWD PKKAKPLKYY 420
  421 NGHKNKKYCL FANMSVPLGK HIISGSEDGR ILVWSIQTKQ IVQILEGHTT PVLATDSHPT 480
  481 LNIIASGGLE PDNVIRIWRR N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] PSI-BLAST 12.69897 Surface layer protein
    2 View Details [117..435] PSI-BLAST 75.522879 No description for 2ovpB was found.
    3 View Details [436..501] PSI-BLAST 96.221849 No description for 2gnqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle