| Protein: | CE06574 |
| Organism: | Caenorhabditis elegans |
| Length: | 501 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06574.
| Description | E-value | Query Range |
Subject Range |
|
|
596.0 | [0..2] | [500..1173] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MNPERQETIS PKNVPFQPVP TPNQQSLQSR MLESNQAVPD AFQKVAAWNH YNAVATPPIG 60
61 VPQTARPPSN QSPHPNPPGY PYQSHQQQFH PLAIAFQQPF GLPQQVIYPP PPPGFT
|
| Detection Method: |  |
| Confidence: | 12.69897 |
| Match: | 1l0qA |
| Description: | Surface layer protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [117-435] |
1 11 21 31 41 51
| | | | | |
1 PHRVQVSPVG LLGPPGFFPQ FAGSTTSQGN PSEVSVRTKS AEGTTGPIAP SITTKPTSTI 60
61 QVAPPRDPVA PTTSSSGITK KPENGEFSLV KTISGHTKSV SVIKFSYCGK YLGTGSADKQ 120
121 IKVWNTVDMT YLQTLASHQL GINDFSWSSN SQFIASASDD TTVKIFDVIS GACLRTMRGH 180
181 TNYVFCCSFN PQSSLIASAG FDETVRVWDF KTGLCVKCIP AHSDPITSIS YNHDGNTMAT 240
241 SSYDGCIRVW DAASGSCLKT LVDTDHAPVT FVCFSPNGKY LLSAQLDSSL KLWDPKKAKP 300
301 LKYYNGHKNK KYCLFANMS
|
| Detection Method: | |
| Confidence: | 75.522879 |
| Match: | 2ovpB |
| Description: | No description for 2ovpB was found. |
|
Region A: Residues: [436-501] |
1 11 21 31 41 51
| | | | | |
1 VPLGKHIISG SEDGRILVWS IQTKQIVQIL EGHTTPVLAT DSHPTLNIIA SGGLEPDNVI 60
61 RIWRRN
|
| Detection Method: | |
| Confidence: | 96.221849 |
| Match: | 2gnqA |
| Description: | No description for 2gnqA was found. |
