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Protein Overview: ndc-80

General Information:
Name(s) found: ndc-80 / CE06537 [WormBase]
Description(s) found:
Found 24 descriptions.
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  • WBGene00003576 locus:ndc-80 Kinetochore protein ndc-80 status:Confirmed UniProt:Q17635 protein_id:CAA92629.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 590 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    gonad morphogenesis [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    regulation of cell migration [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGDRRKTGG LNLNGRASIA ITPTKRFTDY TGSTSVRKTD ARPSLSQPRV SLFNTKNSSV  60
   61 APRDVKSLVS LNGSKIYNFL VEYESSDAPS EQLIMKPRGK NDFIACFELI YQHLSKDYEF 120
  121 PRHERIEEEV SQIFKGLGYP YPLKNSYYQP MGSSHGYPHL LDALSWLIDI IRINSAVSED 180
  181 TQNILFGDFM EQGKAQEKTL NYAWMTSTFR DYTNDRKAAE NPSSSYWDDT KHRLRKYFEQ 240
  241 SNEFEDMTKT AASALEMLNY ECDEIEADKG NEASLKEEIS RIRDDIRKAK DYLEQNLHVK 300
  301 QHMEKELAMV KSEQEEKISE NEKVQKMVDD LKNKIELQKQ IHGLTGKEVR QMNLDNNKDK 360
  361 EVVLEIQSEL DRLSKETWKL KDEDFFKEQK SKFIHLAEQI MKILSGLNIQ MNLEPLRAPT 420
  421 NERDLKDYWE TLNKIWVPEI SRQLHQRKLE LETEQSRFSN KAVTAEERIQ IQSETLCEAK 480
  481 KNEAREERIR RNERDSWKDA RKHIEQRYEQ LLNEKEVLLK QMKLDGSLEK EIEDETARMS 540
  541 ATGEEHIQKR SQLEAGIRQI LDLMVVEIAE IENKKIGFHV QCAGIEKAVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)
    View Run gi|7499968 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] PSI-BLAST 47.522879 No description for 2igpA was found.
    2 View Details [155..524] PSI-BLAST 23.69897 Heavy meromyosin subfragment
    3 View Details [525..590] PSI-BLAST 8.69897 No description for 2dfsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle