| Protein: | ndc-80 |
| Organism: | Caenorhabditis elegans |
| Length: | 590 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ndc-80.
| Description | E-value | Query Range |
Subject Range |
|
|
255.0 | [0..147] | [587..2304] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MFGDRRKTGG LNLNGRASIA ITPTKRFTDY TGSTSVRKTD ARPSLSQPRV SLFNTKNSSV 60
61 APRDVKSLVS LNGSKIYNFL VEYESSDAPS EQLIMKPRGK NDFIACFELI YQHLSKDYEF 120
121 PRHERIEEEV SQIFKGLGYP YPLKNSYYQP MGSS
|
| Detection Method: |  |
| Confidence: | 47.522879 |
| Match: | 2igpA |
| Description: | No description for 2igpA was found. |
|
Region A: Residues: [155-524] |
1 11 21 31 41 51
| | | | | |
1 HGYPHLLDAL SWLIDIIRIN SAVSEDTQNI LFGDFMEQGK AQEKTLNYAW MTSTFRDYTN 60
61 DRKAAENPSS SYWDDTKHRL RKYFEQSNEF EDMTKTAASA LEMLNYECDE IEADKGNEAS 120
121 LKEEISRIRD DIRKAKDYLE QNLHVKQHME KELAMVKSEQ EEKISENEKV QKMVDDLKNK 180
181 IELQKQIHGL TGKEVRQMNL DNNKDKEVVL EIQSELDRLS KETWKLKDED FFKEQKSKFI 240
241 HLAEQIMKIL SGLNIQMNLE PLRAPTNERD LKDYWETLNK IWVPEISRQL HQRKLELETE 300
301 QSRFSNKAVT AEERIQIQSE TLCEAKKNEA REERIRRNER DSWKDARKHI EQRYEQLLNE 360
361 KEVLLKQMKL
|
| Detection Method: | |
| Confidence: | 23.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [525-590] |
1 11 21 31 41 51
| | | | | |
1 DGSLEKEIED ETARMSATGE EHIQKRSQLE AGIRQILDLM VVEIAEIENK KIGFHVQCAG 60
61 IEKAVL
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 2dfsA |
| Description: | No description for 2dfsA was found. |
