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Protein Overview: skp-1

General Information:
Name(s) found: skp-1 / CE06519 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00004806 locus:skp-1 Uncharacterized protein T27F2.1 status:Confirmed UniProt:Q22836 protein_id:CAA98552.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 535 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: molting cycle, protein-based cuticle [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    oviposition [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]
    transcription activator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMKLRDILP APVAADEAAS QIRRDPWFGG RDNEPSAALV SKEPPPYGKR TSFRPRGPED  60
   61 FGDGGAFPEI HVAQFPLGLG LGDMRGKPEN TLALQYGTDG KLQHDAIARI GHVKDKVVYS 120
  121 KLNDMKAKTW NEDDDDIQKP DDDAVIDATE KTRMALEKIV NSKVASALPV RHADKLAPAQ 180
  181 YIRYTPSQQN GAAGSQQRII RMVEEQKDPM EPPKFKINQK IPRAPPSPPA PVMHSPPRKM 240
  241 TAKDQNDWKI PPCISNWKNP KGFTVGLDKR LAADGRGLQQ THINENFAKL ADALYIADRK 300
  301 AREEVETRAQ LERRVAQNKK SEQEAKMAEA AAKARQERSA MRRKDDEDDE QVKVREEIRR 360
  361 DRLDDIRKER NIARSRPDKA DKLRKERERD ISEKIVLGLP DTNQKRTGEP QFDQRLFDKT 420
  421 QGLDSGAMDD DTYNPYDAAW RGGDSVQQHV YRPSKNLDND VYGGDLDKII EQKNRFVADK 480
  481 GFSGAEGSSR GSGPVQFEKD QDVFGLSSLF EHTKEKKRGG DGGDSRGESK RSRRD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] deduced N/A No confident structure predictions are available.
    2 View Details [133..408] PSI-BLAST 6.69897 Heavy meromyosin subfragment
    3 View Details [409..535] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle