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Protein Overview: sdz-31

General Information:
Name(s) found: sdz-31 / CE06411 [WormBase]
Description(s) found:
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  • WBGene00011704 locus:sdz-31 status:Partially_confirmed UniProt:Q22385 protein_id:CAA96685.1 [WormBase]
  • pir||T24824 hypothetical protein T11A5.5 - Caenorhabditis elegans [NCBI NR]
  • gi|3879682|emb|CAA96685.1| C. elegans protein T11A5.5, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17564260|ref|NP_505547.1| SKN-1 Dependent Zygotic transcript family member (sdz-31) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE06411 WBGene00011704 locus:sdz-31 status:Partially_confirmed TR:Q22385 protein_id:CAA96685.1 [wormpep150.fasta]
  • 06411 WBGene00011704 status:Partially_confirmed TR:Q22385 protein_id:CAA96685.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative endoplasmic reticulum protein family member, with a transmembrane domain (5K359) [Caenorhabditis elegans]gi|3879682|emb|CAA96685.1| Hypothetical protein T11A5.5 [Caenorhabditis elegans]gi|7507666|pir||T24824 hypothetical protein T11A5.5 - Caeno [nrdb_11152004_Chlamydomonas]
  • CE06411 WBGene00011704 status:Partially_confirmed TR:Q22385 protein_id:CAA96685.1 [wormpep132.fasta]
  • 06411 WBGene00011704 locus:sdz-31 status:Partially_confirmed TR:Q22385 protein_id:CAA96685.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Partially_confirmed TR:Q22385 protein_id:CAA96685.1 [wormpep115.fasta.reversed]
  • CE06411 status:Predicted TR:Q22385 protein_id:CAA96685.1 [wormpep80.hongbin]
  • CE06411 WBGene00011704 locus:sdz-31 status:Partially_confirmed UniProt:Q22385_CAEEL protein_id:CAA96685.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE06411 WBGene00011704 locus:sdz-31 status:Partially_confirmed UniProt:Q22385_CAEEL protein_id:CAA96685.1| [wormORF-contam.fasta]
  • SKN-1 Dependent Zygotic transcript family member (sdz-31) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein T11A5.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE06411 WBGene00011704 locus:sdz-31 status:Partially_confirmed UniProt:Q22385 protein_id:CAA96685.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • SKN-1 Dependent Zygotic transcript OS=Caenorhabditis elegans GN=sdz-31 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 288 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: transport [IEALink to PubMed article]
    Molecular Function: oxygen transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHHEDNSFQS FKTVGSTAHI IPSLHIMSSI TVFSVILILT IFPLVFTSGH LRLEFTSSEN  60
   61 KFLRLITDYS NETLQLTMGE KKTSSFHPTN EQDTIRIGLS TLNRDPVFYK FKLENTGQHL 120
  121 RNIFDQDDVV VFIQSVFECD EGFFGSKCLL KKAPSTSTIA SKMTSTTTMT TTTTTITTST 180
  181 ESEKQASSKG AGLSMGLEHY NSIIIVVLVI IIITLLILIA VFAVLLFSSR SQNQHIIIAG 240
  241 RKSASKCKKL DFEGFEGKSF ERSNDFQYEE PRYTAAPFGS FFSKQSEY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..152] MSA 1.013961 View MSA. No confident structure predictions are available.
    2 View Details [153..288] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle