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Protein Overview: spo-11

General Information:
Name(s) found: spo-11 / CE06363 [WormBase]
Description(s) found:
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  • WBGene00004985 locus:spo-11 Meiotic recombination protein spo-11 status:Confirmed UniProt:Q22236 protein_id:CAA92974.1 [WormBase]
  • pir||T24522 hypothetical protein T05E11.4 - Caenorhabditis elegans [NCBI NR]
  • gi|3879464|emb|CAA92974.1| C. elegans protein T05E11.4, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|3025217|sp|Q22236.1|SPO11_CAEEL RecName: Full=Meiotic recombination protein spo-11 [NCBI NR]
  • gi|17542064|ref|NP_502081.1| homolog of yeast SPOrulation gene family member (spo-11) [Caenorhabditis elegans] [NCBI NR]
  • (Q22236) Meiotic recombination protein spo-11 [Swiss-Prot]
  • Meiotic recombination protein spo-11 OS=Caenorhabditis elegans GN=spo-11 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE06363 WBGene00004985 locus:spo-11 status:Partially_confirmed SW:Q22236 protein_id:CAA92974.1 [wormpep150.fasta]
  • 06363 WBGene00004985 locus:spo-11 status:Partially_confirmed SW:Q22236 protein_id:CAA92974.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • homolog of yeast SPOrulation gene (spo-11) [Caenorhabditis elegans]gi|3879464|emb|CAA92974.1| Hypothetical protein T05E11.4 [Caenorhabditis elegans]gi|7507191|pir||T24522 hypothetical protein T05E11.4 - Caenorhabditis elegansgi|3025217|sp|Q22236|SPOB_C [nrdb_11152004_Chlamydomonas]
  • locus:spo-11 status:Partially_confirmed SW:Q22236 protein_id:CAA92974.1 [wormpep115.fasta.reversed]
  • CE06363 locus:spo-11 status:Predicted SW:Q22236 protein_id:CAA92974.1 [wormpep80.hongbin]
  • CE06363 WBGene00004985 locus:spo-11 status:Partially_confirmed UniProt:SPO11_CAEEL protein_id:CAA92974.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE06363 WBGene00004985 locus:spo-11 status:Partially_confirmed UniProt:SPO11_CAEEL protein_id:CAA92974.1| [wormORF-contam.fasta]
  • Hypothetical protein T05E11.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Meiotic recombination protein spo-11 [nr-271106-contam.fasta]
  • homolog of yeast SPOrulation gene family member (spo-11) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE06363 WBGene00004985 locus:spo-11 status:Confirmed UniProt:Q22236 protein_id:CAA92974.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE06363 WBGene00004985 locus:spo-11 status:Confirmed UniProt:Q22236 protein_id:CAA92974.1 Meiotic recombination protein spo-11 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 425 amino acids

    Gene Ontology:
    Cellular Component: chromosome [IEALink to PubMed article]
    Biological Process: DNA topological change [IEALink to PubMed article]
    DNA metabolic process [IEALink to PubMed article]
    DNA modification [IEALink to PubMed article]
    meiosis [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    DNA binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    DNA topoisomerase (ATP-hydrolyzing) activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYEYSFNPNI DHEPGSVESQ QSTIYSDSDD SDDSFLDDEV IPPKEQAMRK IEFALADIKR  60
   61 QMDNKEKSLT LRISTSKSHF CLRYTAKRKG KLDRDLHCLH QVYDLLENDK RSTKRELYYE 120
  121 HKAVYGNQKY LDSSIKSICE LLNESRANLN ILSCGRGIIR GAITFLVENV GVIDARVQEV 180
  181 LITDALLFSN IISEADFILV VEKDTTFQKL MDENFQAMFP RGILATSKGY PDIATRNVLK 240
  241 MLSEKRKFPI YGLFDADPHG IEIYLTYKYG PTKEFAEGRG AFVPTIEWIG LFPTDFHRFT 300
  301 IDQSQCLPLV RTDFVKIEKM IPRSIQLGEI VVTRELDWMI QNKFKMELES INMCGQEYMA 360
  361 RFLIAPRVMS IEKEIPIQPE TIINEYHEDS QCSLSTDDDR EAKDDDYIDS DAEEKFQNMI 420
  421 DNDSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..425] PSI-BLAST 90.69897 No description for 2q2eA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle