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Protein Overview: CE06216

General Information:
Name(s) found: CE06216 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00011004 status:Partially_confirmed UniProt:Q21703 protein_id:CAA94842.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 347 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: bacteriochlorophyll biosynthetic process [IEALink to PubMed article]
    threonine catabolic process [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    L-threonine 3-dehydrogenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQDNLSAVL YGINDLRLEQ APISKPGPRQ VLVKINTVGI CGSDVHFLTH GAIGSFVVKE  60
   61 PMVLGHESSG VVSEIGSEVK GFKVGDRIAM EPGLPCKLCE HCKIGRYNLC PDMRFFATPP 120
  121 VNGALSRFVV HDADFCFKLP DNLSFEDGAL LEPLSVAIQA CRRGTVQMGQ KILVLGAGPI 180
  181 GVLNLLTAKA IGASKVVITD LNDERLALAR LLGADATINV MGKRSDEVRS EIIKAFGDQQ 240
  241 PHVSIECTGV QPCVETAIMT TRSGGVVVLV GLGAERVEIP LIQSPTREVD LRGTFRSANC 300
  301 YSTAIELISS GKLDLSGLTR AHYKLEESLE AFKRTQNGDV IKVFIHC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..347] PSI-BLAST 86.0 Human SDH/NADH/inhibitor complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • L-iditol 2-dehydrogenase activity
    		•  3.00103406168296 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  2.94416173750168 bayes_pls_golite062009
  • alcohol dehydrogenase activity, zinc-dependent
    		•  2.26153457113968 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.69771604880532 bayes_pls_golite062009
  • chaperone binding
    		•  0.484522928331397 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.418775403210681 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.418142370391682 bayes_pls_golite062009
  • NAD or NADH binding
    		•  0.39817482511246 bayes_pls_golite062009
  • L-arabinitol 2-dehydrogenase activity
    		•  0.382131941157781 bayes_pls_golite062009
  • 3-hydroxyacyl-CoA dehydrogenase activity
    		•  0.36426941921419 bayes_pls_golite062009
  • glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity
    		•  0.361275519814065 bayes_pls_golite062009
  • coenzyme binding
    		•  0.35922330382799 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.32207755075663 bayes_pls_golite062009
  • glyceraldehyde-3-phosphate dehydrogenase activity
    		•  0.298691872199351 bayes_pls_golite062009
  • ATPase activity
    		•  0.275256680720412 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle