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Protein Overview: lys-6

General Information:
Name(s) found: lys-6 / CE06005 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00003095 locus:lys-6 status:Confirmed UniProt:Q20968 protein_id:CAA97801.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 214 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell wall macromolecule catabolic process [IEALink to PubMed article]
    peptidoglycan catabolic process [IEALink to PubMed article]
    Molecular Function: lysozyme activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLVSTLIL ISAVSAVRNG IDFIQPVSVA TFTCVKNAGY SFVIPRVFTS VGTVDHTGIQ  60
   61 NVANARAAGL TDVDGYIFPC LKSTCASAAN QVKASLDAVK AAGTKISTLW LDIERLNWPA 120
  121 DHASNRAFIE AMVSEAKAYG QQVGIYSNYY NWQDIVGLDY HGQSSLMLWW AAYDGVKDFS 180
  181 KFAAFGGWSS PTIHQWEGTT AGPCGVSVDM NYVP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..214] PSI-BLAST 44.0 Streptomyces lysozyme

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.32563207632796 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85514037342026 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80912338090552 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.41375210927547 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle