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Protein Overview: rps-9

General Information:
Name(s) found: rps-9 / CE05849 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00004478 locus:rps-9 40S ribosomal protein S9 status:Confirmed UniProt:Q20228 protein_id:CAA93262.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 189 amino acids

    Gene Ontology:
    Cellular Component: ribonucleoprotein complex [IEALink to PubMed article]
    small ribosomal subunit [IEALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    determination of adult lifespan [IMPLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of multicellular organism growth [IMPLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    translation [IEALink to PubMed article]
    Molecular Function: RNA binding [IEALink to PubMed article]
    structural constituent of ribosome [IEALink to PubMed article]
    rRNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLKTVQSK VTKSPRRPFE KERLDQELKL IGTFGLKNKR EVWRVKYTLA KVRKAARELL  60
   61 TLEDKDPKRL FEGNALLRRL VKIGVLDETK MKLDYVLGLK VEDFLERRLQ TQVFKLGLAK 120
  121 SIHHARILIK QHHIRVRRQV VDVPSFIVRL DSQKHIDFSL QSPYGGGRPG RVKRRTLRKG 180
  181 DGAGGDDEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] PSI-BLAST 40.0 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle