YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: aqp-6

General Information:
Name(s) found: aqp-6 / CE05345 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00000174 locus:aqp-6 status:Partially_confirmed UniProt:Q18352 protein_id:CAA98110.1 [WormBase]
  • pir||T19636 hypothetical protein C32C4.2 - Caenorhabditis elegans [NCBI NR]
  • gi|3874637|emb|CAA98110.1| C. elegans protein C32C4.2, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17558372|ref|NP_505727.1| AQuaPorin or aquaglyceroporin related family member (aqp-6) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE05345 WBGene00000174 locus:aqp-6 MIP protein status:Partially_confirmed TR:Q18352 protein_id:CAA98110.1 [wormpep150.fasta]
  • 05345 WBGene00000174 locus:aqp-6 MIP protein status:Partially_confirmed TR:Q18352 protein_id:CAA98110.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • aquaporin (5L131) [Caenorhabditis elegans]gi|3874637|emb|CAA98110.1| Hypothetical protein C32C4.2 [Caenorhabditis elegans]gi|7496829|pir||T19636 hypothetical protein C32C4.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • MIP protein status:Partially_confirmed TR:Q18352 protein_id:CAA98110.1 [wormpep115.fasta.reversed]
  • CE05345 MIP protein status:Predicted TR:Q18352 protein_id:CAA98110.1 [wormpep80.hongbin]
  • CE05345 WBGene00000174 locus:aqp-6 MIP protein status:Partially_confirmed UniProt:Q18352_CAEEL protein_id:CAA98110.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE05345 WBGene00000174 locus:aqp-6 MIP protein status:Partially_confirmed UniProt:Q18352_CAEEL protein_id:CAA98110.1| [wormORF-contam.fasta]
  • Hypothetical protein C32C4.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • AQuaPorin or aquaglyceroporin related family member (aqp-6) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE05345 WBGene00000174 locus:aqp-6 MIP protein status:Partially_confirmed UniProt:Q18352 protein_id:CAA98110.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE05345 WBGene00000174 locus:aqp-6 status:Partially_confirmed UniProt:Q18352 protein_id:CAA98110.1 [wormpep246-ecoli-contam.fasta]
  • Isoform of H2FLH4, AQuaPorin or aquaglyceroporin related OS=Caenorhabditis elegans GN=aqp-6 PE=3 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 244 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    cilium [IDALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    neuronal cell body [IDALink to PubMed article]
    Biological Process: transport [IEALink to PubMed article]
    Molecular Function: transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEDEKDYTI YSKCAAEFIA VLLFVYIGSM QAAGVFLHDG VLHAAFAHGV AIFVLAATFG  60
   61 GVSGAHINPA VTFGIALVGR ISPIHAVCYV VSQLLGSVFG ALLVRISLPY KMYNVISAGA 120
  121 TLCGKGYNWQ EGLTAEIVTT YILVQTVLLC AVDTDKNRLA PLAIGFSLII EILAAGAISG 180
  181 ASMNPARSFG PNIMGQVFLK PEHLDAQYMY WNYHWIYYIG PIIGAFIAAG VYRMFFARDY 240
  241 RVLA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..244] PSI-BLAST 51.0 Crystal structure of the spinach aquaporin SoPIP2;1 in an open conformation to 3.9 resolution


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle