YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	aqp-6
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEDEKDYTI YSKCAAEFIA VLLFVYIGSM QAAGVFLHDG VLHAAFAHGV AIFVLAATFG  60
   61 GVSGAHINPA VTFGIALVGR ISPIHAVCYV VSQLLGSVFG ALLVRISLPY KMYNVISAGA 120
  121 TLCGKGYNWQ EGLTAEIVTT YILVQTVLLC AVDTDKNRLA PLAIGFSLII EILAAGAISG 180
  181 ASMNPARSFG PNIMGQVFLK PEHLDAQYMY WNYHWIYYIG PIIGAFIAAG VYRMFFARDY 240
  241 RVLA

Type	Start	End	Confidence
Cytoplasmic	1	13	0.86
Transmembrane Helix	14	37	0.81
Non-Cytoplasmic	38	43	0.79
Transmembrane Helix	44	67	0.86
Cytoplasmic	68	84	0.71
Transmembrane Helix	85	106	0.88
Non-Cytoplasmic	107	131	0.86
Transmembrane Helix	132	152	0.83
Cytoplasmic	153	161	0.79
Transmembrane Helix	162	182	0.93
Non-Cytoplasmic	183	214	0.94
Transmembrane Helix	215	236	0.94
Cytoplasmic	237	244	0.97