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Protein Overview: CE05242

General Information:
Name(s) found: CE05242 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00007426 status:Partially_confirmed UniProt:Q17817 protein_id:CAA96588.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 423 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    outer membrane-bounded periplasmic space [IEALink to PubMed article]
    Biological Process: transport [IEALink to PubMed article]
    Molecular Function: transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKKPCAKPG AEIEIISMVM QILDWQWEVI DTEKEFNVVN DFGNPQPDGN FSGIMGLLAQ  60
   61 DKIDMSGLSM RITPARMEFA HFTFPIRYFQ QVYIIKRPAE NDFRNFVFAP FTTDMWLLLL 120
  121 ATIMGASTMR FACALYWDSR VGSKFNIYTS SVLETFGLML KQRVQDPTAV STMLLEGFLI 180
  181 VAMMSIAQYY QTSMNSRLTA PPSSRIPFLH QNQLIELLLD KETYLTYYFN LTLEGSTEKN 240
  241 EYNIKRALAM NPIVVRAREA DLIKEIQKGG VFYSTYDIEF LPQAVSVWDK RQGLTVIRDT 300
  301 SGILSYVAFG FSISNRKLCQ MFNKALLKIL PGIASITLGP GYGTKKQPED ITVQVKKTRL 360
  361 SLKKHLEQLF YIYLIGCGIA LAFFIIEKVF FRMRVLKRQK VYQVNRQESD VTPECTFTPL 420
  421 PYH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] PSI-BLAST 19.30103 No description for 2v3tA was found.
    2 View Details [161..423] PSI-BLAST 25.69897 Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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