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Protein Overview: CE05241

General Information:
Name(s) found: CE05241 [WormBase]
Description(s) found:
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  • WBGene00007425 status:Partially_confirmed UniProt:Q17816 protein_id:CAA96587.1 [WormBase]
  • pir||T19078 hypothetical protein C08B6.4 - Caenorhabditis elegans [NCBI NR]
  • gi|71983294|ref|NP_001023634.1| hypothetical protein C08B6.4 [Caenorhabditis elegans] [NCBI NR]
  • gi|3874141|emb|CAA96587.1| C. elegans protein C08B6.4a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_505600.1| chitinase family member (5K597) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE05241 WBGene00007425 chitinase status:Partially_confirmed TR:Q17816 protein_id:CAA96587.1 [wormpep150.fasta]
  • 05241 WBGene00007425 chitinase status:Partially_confirmed TR:Q17816 protein_id:CAA96587.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • chitinase family member (5K597) [Caenorhabditis elegans]gi|3874141|emb|CAA96587.1| Hypothetical protein C08B6.4a [Caenorhabditis elegans]gi|7495654|pir||T19078 hypothetical protein C08B6.4 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • chitinase status:Partially_confirmed TR:Q17816 protein_id:CAA96587.1 [wormpep115.fasta.reversed]
  • CE05241 chitinase status:Predicted TR:Q17816 protein_id:CAA96587.1 [wormpep80.hongbin]
  • CE05241 WBGene00007425 chitinase status:Partially_confirmed UniProt:Q17816_CAEEL protein_id:CAA96587.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE05241 WBGene00007425 chitinase status:Partially_confirmed UniProt:Q17816_CAEEL protein_id:CAA96587.1| [wormORF-contam.fasta]
  • Hypothetical protein C08B6.4a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C08B6.4a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE05241 WBGene00007425 chitinase status:Partially_confirmed UniProt:Q17816 protein_id:CAA96587.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE05241 WBGene00007425 status:Partially_confirmed UniProt:Q17816 protein_id:CAA96587.1 [wormpep246-ecoli-contam.fasta]
  • Isoform of Q65ZB0, Uncharacterized protein OS=Caenorhabditis elegans GN=C08B6.4 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 447 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell wall macromolecule catabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRIKSVILT VFLIFAHNSI VSAVDYGNAS SCPKAAKYGT GPPESCTQPT DPNNMPASEL  60
   61 ESWFTREMFE DLFPFANLGW GPSSCWPYSY DAFKIASRYF PEFGTSINVN NTVYTADENK 120
  121 KRDLAAFFAH AVQETGENNI ALYDTLSDQD ASNCFYRGGF YNWFEGGPTS SFLDPKTPGY 180
  181 TPADGNSCAS AGLYCSASDQ ITYFYPCSNS TISNTAAPYK GCYFGRGAIQ ISYNYNYGQF 240
  241 QDWLRTVNIK VDLLKEPNLV MTKMDPPLAV LASLWFYMTP QPPKPAMHDI VMGNWNSGAK 300
  301 NAAAGYDGPI FGPTSLIINN ECSGEDPTNP GGPGESRRIK AFKWFCGYFD TPTGPEATLS 360
  361 CKNMPVPLDQ IFYNLSYQPD WTSTWKDVPC TCAPASYGGL IFYYDPDYYP SSFAAQNDYN 420
  421 RIKCIASIYA NPSMYSMDNK TSPCLNY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..447] PSI-BLAST 81.30103 No description for 2dkvA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle