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View Structure Prediction Details

Protein: CE05241
Organism: Caenorhabditis elegans
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05241.

Description E-value Query
Range
Subject
Range
gi|187031783, gi... - gi|39593263|emb|CAE64733.1| Hypothetical protein CBG09520 [Caenorhabditis briggsae], gi|187031783|em...
gi|157763464 - gi|157763464|ref|XP_001674074.1| Hypothetical protein CBG09520 [Caenorhabditis briggsae AF16]
461.0 [0..1] [447..1]

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Predicted Domain #1
Region A:
Residues: [1-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRIKSVILT VFLIFAHNSI VSAVDYGNAS SCPKAAKYGT GPPESCTQPT DPNNMPASEL  60
   61 ESWFTREMFE DLFPFANLGW GPSSCWPYSY DAFKIASRYF PEFGTSINVN NTVYTADENK 120
  121 KRDLAAFFAH AVQETGENNI ALYDTLSDQD ASNCFYRGGF YNWFEGGPTS SFLDPKTPGY 180
  181 TPADGNSCAS AGLYCSASDQ ITYFYPCSNS TISNTAAPYK GCYFGRGAIQ ISYNYNYGQF 240
  241 QDWLRTVNIK VDLLKEPNLV MTKMDPPLAV LASLWFYMTP QPPKPAMHDI VMGNWNSGAK 300
  301 NAAAGYDGPI FGPTSLIINN ECSGEDPTNP GGPGESRRIK AFKWFCGYFD TPTGPEATLS 360
  361 CKNMPVPLDQ IFYNLSYQPD WTSTWKDVPC TCAPASYGGL IFYYDPDYYP SSFAAQNDYN 420
  421 RIKCIASIYA NPSMYSMDNK TSPCLNY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.30103
Match: 2dkvA
Description: No description for 2dkvA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle