YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE04753

General Information:
Name(s) found: CE04753 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00019422 status:Partially_confirmed UniProt:Q21251 protein_id:CCD72690.1 [WormBase]
  • pir||T16577 hypothetical protein K05G3.1 - Caenorhabditis elegans [NCBI NR]
  • gi|17568711|ref|NP_510676.1| hypothetical protein K05G3.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|1109861|gb|AAB52496.1| Hypothetical protein K05G3.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE04753 WBGene00019422 status:Partially_confirmed TR:Q21251 protein_id:AAB52496.1 [wormpep150.fasta]
  • 04753 WBGene00019422 status:Partially_confirmed TR:Q21251 protein_id:AAB52496.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • 3'-5' exonuclease (XR115) [Caenorhabditis elegans]gi|1109861|gb|AAB52496.1| Hypothetical protein K05G3.1 [Caenorhabditis elegans]gi|7452580|pir||T16577 hypothetical protein K05G3.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q21251 protein_id:AAB52496.1 [wormpep115.fasta.reversed]
  • CE04753 status:Predicted TR:Q21251 protein_id:AAB52496.1 [wormpep80.hongbin]
  • CE04753 WBGene00019422 status:Partially_confirmed UniProt:Q21251_CAEEL protein_id:AAB52496.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE04753 WBGene00019422 status:Partially_confirmed UniProt:Q21251_CAEEL protein_id:AAB52496.1| [wormORF-contam.fasta]
  • Hypothetical protein K05G3.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • K05G3.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE04753 WBGene00019422 status:Partially_confirmed UniProt:Q21251 protein_id:AAB52496.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE04753 WBGene00019422 status:Partially_confirmed UniProt:Q21251 protein_id:CCD72690.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_K05G3.1 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 203 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    3'-5' exonuclease activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRLNEFINL AKEQVSQGVN ERRTSIMERI VEETEDFNKP AEFENLTITV TEDKEKAKRV  60
   61 LEKFEKHPTV PIYFDSEHSY IRLKNDTKVA AIQLYDSCTR HVLVWRLHNA DHEYLKGVRE 120
  121 QLELLSKARM FATFGKEEFL ENAIKYVTKD LQVNQKSLEA LLLKKEIVIT KWETFSDWTR 180
  181 PVLRPSQERY AVYDVIRLFD LDQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..203] PSI-BLAST 36.39794 Crystal Structure of Escherichia coli RNase D, an exoribonuclease involved in structured RNA processing

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle