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Protein Overview: gyg-1

General Information:
Name(s) found: gyg-1 / CE04664 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00006863 locus:gyg-1 status:Partially_confirmed UniProt:H2KYQ5 protein_id:CCD64318.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 429 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate biosynthetic process [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: transferase activity, transferring hexosyl groups [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEAWITLAT NDNYAQGALV LVHSLRTAGT TRKIHCLISN EVSAPVRKQL EEHFDDVSIV  60
   61 DVFNSNDSDN LRLIERPDLG VTFTKLHCWR LTQYTKCVFL DADTLVLRNA DELFTRPDFS 120
  121 AASDIGWPDS FNSGVFVYVP NNETYRQLVD FAVTHGSYDG GDQGLLNDFF SNWRDLPSEH 180
  181 RLPFIYNMTA GAFYTYAAAY KRYGANTKIV HFIGSVKPWH GSAAVHTGEH FQQWQKIYHA 240
  241 HVNHTSRTNE HAAVFPSHHH TPEHRSHSAD HPKIERKDSI VREIGNFVMH VVQSVNILPS 300
  301 YDTDANTSDS HRNNEPHKHD QQREEHHELP HNKFQTPHEE SQDIVGSTDC FGSQMPKYNA 360
  361 DSETDREVEQ ITNNTPCPAF VPFERREEYQ AASPSTEERR AAWEAGQPDY LGRDAFVHIQ 420
  421 EALNRALNE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..314] PSI-BLAST 70.221849 apo form of a mutant of glycogenin in which Asp159 is replaced by Asn
    2 View Details [315..429] FFAS03 3.59 apo form of the 162S mutant of glycogenin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity, transferring hexosyl groups
    		•  2.70047942699289 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  2.33861720107822 bayes_pls_golite062009
  • transferase activity
    		•  2.17535315350752 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  2.03515733046585 bayes_pls_golite062009
  • catalytic activity
    		•  1.88676710996045 bayes_pls_golite062009
  • acetylgalactosaminyltransferase activity
    		•  1.33788133706753 bayes_pls_golite062009
  • uridylyltransferase activity
    		•  1.27888067902271 bayes_pls_golite062009
  • cytidylyltransferase activity
    		•  1.14240569193314 bayes_pls_golite062009
  • polypeptide N-acetylgalactosaminyltransferase activity
    		•  1.10309252319727 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.02084820914491 bayes_pls_golite062009
  • glycogenin glucosyltransferase activity
    		•  0.968757748180341 bayes_pls_golite062009
  • mannosyltransferase activity
    		•  0.91123217364068 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.897978517422275 bayes_pls_golite062009
  • UDP-N-acetylglucosamine diphosphorylase activity
    		•  0.513376694534047 bayes_pls_golite062009
  • binding
    		•  0.503732110578643 bayes_pls_golite062009
  • guanylyltransferase activity
    		•  0.453684240436268 bayes_pls_golite062009
  • glucuronosyltransferase activity
    		•  0.287421645469793 bayes_pls_golite062009
  • mannose-phosphate guanylyltransferase activity
    		•  0.2363835251362 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle