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View Structure Prediction Details

Protein: gyg-1
Organism: Caenorhabditis elegans
Length: 429 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gyg-1.

Description E-value Query
Range
Subject
Range
gi|89954535 - gi|89954535|gb|ABD83666.1| glycogenin 2 [Homo sapiens]
323.0 [0..2] [427..36]

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Predicted Domain #1
Region A:
Residues: [1-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEAWITLAT NDNYAQGALV LVHSLRTAGT TRKIHCLISN EVSAPVRKQL EEHFDDVSIV  60
   61 DVFNSNDSDN LRLIERPDLG VTFTKLHCWR LTQYTKCVFL DADTLVLRNA DELFTRPDFS 120
  121 AASDIGWPDS FNSGVFVYVP NNETYRQLVD FAVTHGSYDG GDQGLLNDFF SNWRDLPSEH 180
  181 RLPFIYNMTA GAFYTYAAAY KRYGANTKIV HFIGSVKPWH GSAAVHTGEH FQQWQKIYHA 240
  241 HVNHTSRTNE HAAVFPSHHH TPEHRSHSAD HPKIERKDSI VREIGNFVMH VVQSVNILPS 300
  301 YDTDANTSDS HRNN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.221849
Match: 1zcvA
Description: apo form of a mutant of glycogenin in which Asp159 is replaced by Asn
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity, transferring hexosyl groups 2.70047942699289 bayes_pls_golite062009
UDP-glycosyltransferase activity 2.33861720107822 bayes_pls_golite062009
transferase activity 2.17535315350752 bayes_pls_golite062009
nucleotidyltransferase activity 2.03515733046585 bayes_pls_golite062009
catalytic activity 1.88676710996045 bayes_pls_golite062009
acetylgalactosaminyltransferase activity 1.33788133706753 bayes_pls_golite062009
uridylyltransferase activity 1.27888067902271 bayes_pls_golite062009
cytidylyltransferase activity 1.14240569193314 bayes_pls_golite062009
polypeptide N-acetylgalactosaminyltransferase activity 1.10309252319727 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.02084820914491 bayes_pls_golite062009
glycogenin glucosyltransferase activity 0.968757748180341 bayes_pls_golite062009
mannosyltransferase activity 0.91123217364068 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 0.897978517422275 bayes_pls_golite062009
UDP-N-acetylglucosamine diphosphorylase activity 0.513376694534047 bayes_pls_golite062009
binding 0.503732110578643 bayes_pls_golite062009
guanylyltransferase activity 0.453684240436268 bayes_pls_golite062009
glucuronosyltransferase activity 0.287421645469793 bayes_pls_golite062009
mannose-phosphate guanylyltransferase activity 0.2363835251362 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [315-429]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPHKHDQQRE EHHELPHNKF QTPHEESQDI VGSTDCFGSQ MPKYNADSET DREVEQITNN  60
   61 TPCPAFVPFE RREEYQAASP STEERRAAWE AGQPDYLGRD AFVHIQEALN RALNE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.59
Match: 1zcuA
Description: apo form of the 162S mutant of glycogenin
Matching Structure (courtesy of the PDB):

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