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Protein Overview: CE04478

General Information:
Name(s) found: CE04478 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00017992 status:Confirmed UniProt:Q19971 protein_id:CCD70436.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 549 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    transmembrane receptor protein tyrosine kinase signaling pathway [IEALink to PubMed article]
    protein amino acid phosphorylation [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    transmembrane receptor protein tyrosine kinase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQLQKDAQE NECRELIEVP SGHDYQIRQY IEKYPQFLWK YSEGVTIPGY VLNIAEQLNS  60
   61 EYGNVENIPI DLYPCEYYRI VEHSMPTDIG LQPKRFDRIK ENLTEKLQQV FRHQDADLYM 120
  121 PENHLIPTVA CAVCIQGTWY RGKIENVPPR GIWMYVNLID AGMSRQVMKS DVRRLPLAFG 180
  181 HYPPMVVKAT IRGAVIHRMD RGKVDQFQNM IRNIDYLARC QITTCTEPFQ IVLCHPKYEF 240
  241 MNMCSFLLAP RRGQPSQEGV WIPREIAKQL ERENGFERND YDDSGADSDF LEDEEEEDAG 300
  301 WDYGEGDDYA YLRSFPPACK IFRMSEDEFM VERIENERII YLTSKDMLER RREAEEYLTK 360
  361 EKESLESLPD VWMAYGTSCS VFHQGTMKRA SCCGEEGSTI QLLLIDYGIS IEVSKSDVYN 420
  421 IPNKDEVNME PFVTLVSIKS FPFIHYSRVK ILQELLPRGT PVKFHRDRKC KEIPTKGEIY 480
  481 QMNGTSVEQS VSEIVSSCQL DLECNSLLPS RIANNELTQL LAYCINYEFM YKSPNVVIYK 540
  541 KSKRVKSHF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..301] PSI-BLAST 37.522879 No description for 2hqeA was found.
    2 View Details [302..441] PSI-BLAST 8.69897 No description for 2eqkA was found.
    3 View Details [442..549] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.26292977606008 bayes_pls_golite062009
  • protein binding
    		•  1.07359800222856 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle