YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE04160

General Information:
Name(s) found: CE04160 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00016383 locus:zgpa-1 status:Confirmed UniProt:Q18418 protein_id:CCD66580.1 [WormBase]
  • pir||T34154 hypothetical protein C33H5.17 - Caenorhabditis elegans [NCBI NR]
  • gi|17539012|ref|NP_501296.1| hypothetical protein C33H5.17 [Caenorhabditis elegans] [NCBI NR]
  • gi|1086596|gb|AAA82274.1| Hypothetical protein C33H5.17 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE04160 WBGene00016383 status:Partially_confirmed TR:Q18418 protein_id:AAA82274.1 [wormpep150.fasta]
  • 04160 WBGene00016383 status:Partially_confirmed TR:Q18418 protein_id:AAA82274.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • zn-finger, C-x8-C-x5-C-x3-H type and D111/G-patch domain containing protein (49.5 kD) (4I576Co) [Caenorhabditis elegans]gi|1086596|gb|AAA82274.1| Hypothetical protein C33H5.17 [Caenorhabditis elegans]gi|7496956|pir||T34154 hypothetical protein C33H5.17 [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q18418 protein_id:AAA82274.1 [wormpep115.fasta.reversed]
  • CE04160 status:Partially_confirmed TR:Q18418 protein_id:AAA82274.1 [wormpep80.hongbin]
  • CE04160 WBGene00016383 status:Partially_confirmed UniProt:Q18418_CAEEL protein_id:AAA82274.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE04160 WBGene00016383 status:Partially_confirmed UniProt:Q18418_CAEEL protein_id:AAA82274.1| [wormORF-contam.fasta]
  • Hypothetical protein C33H5.17 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C33H5.17 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE04160 WBGene00016383 status:Partially_confirmed UniProt:Q18418 protein_id:AAA82274.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE04160 WBGene00016383 status:Confirmed UniProt:Q18418 protein_id:CCD66580.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE04160 WBGene00016383 locus:zgpa-1 status:Confirmed UniProt:Q18418 protein_id:CCD66580.1 [wormpep246-ecoli-contam.fasta]
  • Zinc finger G-PAtch domain-containing protein homolog OS=Caenorhabditis elegans GN=zgpa-1 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 432 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: lipid storage [IMP]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELENLKDQ IKRIDEMIVQ ETNEETRVEY EQTKMDLEEL VSLMEEDEEK TQKSPDDDEI  60
   61 DEQDEDSAEI DDTSTDSLLG SRCMVPYDSD RSLSLHTAII MEIESSKRVR VLFSHPTCSA 120
  121 MKPCTHFLSS SCKFNENCRF SHGYSVELER IQDYQVPDYS FIVEEGLVLV KGMSDIWELG 180
  181 RISAIDTQNV AVKVLKSGIE ISSKRKDLVP IGEVEEPTKQ EQSSESWKEL KQETLGNVTV 240
  241 GDLGKWNGGG VGMKLMMKMG YKVGEGLGKR SDGIVHAIQA RICKKNASLD EVMTRKRKFI 300
  301 DRKEVQKNKN IKKLKTTDES EMDIFAFINR KLEKKNERTF ADVRKETQEM AGYSSKTLGA 360
  361 KNLDLELELK QLKEKQNKLK SGIQRNRGDK NTVSKMSESL REVDAKIESI NRKLNRIQSE 420
  421 VSSRNSKRKN EF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] PSI-BLAST 11.09691 Survival motor neuron protein 1, smn
    2 View Details [143..432] PSI-BLAST 20.522879 Heavy meromyosin subfragment

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.346102840207765 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle